Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MTND2P33-201ENST00000506452 1031 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 NDUFB4P2-201ENST00000509515 391 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 RNA5SP249-201ENST00000516127 99 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC005868.1-201ENST00000536421 331 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC245505.1-201ENST00000556398 224 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC016180.1-201ENST00000567945 403 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.43□□□□□ -1.7
SUMO3P55854 AC020910.3-201ENST00000603701 874 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AL121932.1-201ENST00000605542 214 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC004492.1-201ENST00000607036 742 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AL445222.1-201ENST00000607259 628 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 OR10AB1P-201ENST00000609613 938 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC103710.1-201ENST00000610003 901 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC018755.4-201ENST00000619715 454 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 AC068792.1-201ENST00000621354 417 ntBASIC4.43□□□□□ -1.7
SUMO3P55854 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.43□□□□□ -1.7
SUMO3P55854 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SUMO3P55854 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SUMO3P55854 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 AL359922.3-201ENST00000624779 1670 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 Y_RNA.3-201ENST00000362331 103 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 U3.20-201ENST00000390909 217 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AL049693.1-201ENST00000402760 611 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 FCF1P10-201ENST00000407590 479 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 U3.35-201ENST00000408405 208 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 Y_RNA.619-201ENST00000410951 90 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 COX6B1P1-201ENST00000415962 213 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 FABP7P1-201ENST00000424004 391 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 NMNAT1P2-201ENST00000435192 860 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 PTMAP6-201ENST00000439110 327 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 RPL17P49-201ENST00000443728 411 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC112653.1-201ENST00000443851 386 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 H2AFZP5-201ENST00000446960 382 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.42□□□□□ -1.7
SUMO3P55854 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.42□□□□□ -1.7
SUMO3P55854 KLF3P2-201ENST00000465138 268 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 RPL7P16-201ENST00000479738 738 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 RPL23AP72-201ENST00000492447 435 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 RPS4XP18-201ENST00000495480 763 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 RN7SL808P-201ENST00000496066 299 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC108145.1-201ENST00000503770 153 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.42□□□□□ -1.7
SUMO3P55854 RNU6-709P-201ENST00000517257 104 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 AC008694.2-201ENST00000517591 306 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 AP003497.1-201ENST00000528472 562 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 GSTP1P1-201ENST00000548078 319 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 PCNPP1-201ENST00000552501 511 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.42□□□□□ -1.7
SUMO3P55854 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.42□□□□□ -1.7
SUMO3P55854 AL157394.1-201ENST00000562983 1224 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 BGLT3-201ENST00000564523 994 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.42□□□□□ -1.7
SUMO3P55854 CYCSP40-201ENST00000575927 294 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 MIR3682-201ENST00000581338 84 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 AC011468.4-201ENST00000603942 409 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC055876.5-201ENST00000605667 259 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 RNU6-87P-201ENST00000607561 108 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC008498.1-201ENST00000613012 531 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 MIR6719-201ENST00000622428 87 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC006065.5-201ENST00000623427 349 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AC079597.1-201ENST00000624306 508 ntBASIC4.42□□□□□ -1.7
SUMO3P55854 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SUMO3P55854 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SUMO3P55854 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms