Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH13P55290 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.9□□□□□ -1.79
CDH13P55290 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH13P55290 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH13P55290 AC009097.3-201ENST00000563557 1018 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH13P55290 IPO5P1-202ENST00000600039 287 ntBASIC3.9□□□□□ -1.79
CDH13P55290 DPRXP5-201ENST00000604662 539 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC080013.3-201ENST00000606839 578 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AP003392.5-201ENST00000607857 415 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH13P55290 AC073968.1-201ENST00000618594 637 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC092650.2-201ENST00000619984 902 ntBASIC3.9□□□□□ -1.79
CDH13P55290 AC004943.3-201ENST00000624116 600 ntBASIC3.9□□□□□ -1.79
CDH13P55290 CYP3A51P-201ENST00000633513 256 ntBASIC3.9□□□□□ -1.79
CDH13P55290 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH13P55290 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH13P55290 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH13P55290 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CDH13P55290 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH13P55290 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH13P55290 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 BDP1P-201ENST00000582658 1990 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 OR11H4-201ENST00000315409 1082 ntBASIC3.89□□□□□ -1.79
CDH13P55290 SNORA60-201ENST00000362396 134 ntBASIC3.89□□□□□ -1.79
CDH13P55290 RNU6-83P-201ENST00000384568 112 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC016769.3-201ENST00000396562 315 ntBASIC3.89□□□□□ -1.79
CDH13P55290 EIF5P1-201ENST00000400019 1231 ntBASIC3.89□□□□□ -1.79
CDH13P55290 RNA5SP56-201ENST00000410277 118 ntBASIC3.89□□□□□ -1.79
CDH13P55290 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 AL035410.1-201ENST00000427409 427 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 MTCO2P20-201ENST00000437339 673 ntBASIC3.89□□□□□ -1.79
CDH13P55290 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH13P55290 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 FABP3P2-201ENST00000453169 399 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 RPL18AP17-201ENST00000455326 198 ntBASIC3.89□□□□□ -1.79
CDH13P55290 snoU13.3-201ENST00000459441 104 ntBASIC3.89□□□□□ -1.79
CDH13P55290 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 UQCRHP4-201ENST00000471686 272 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC105137.1-201ENST00000484355 562 ntBASIC3.89□□□□□ -1.79
CDH13P55290 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 RPL7P24-201ENST00000493052 752 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC108078.3-201ENST00000502633 489 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.89□□□□□ -1.79
CDH13P55290 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
CDH13P55290 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH13P55290 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 HSPE1P3-201ENST00000559254 309 ntBASIC3.89□□□□□ -1.79
CDH13P55290 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 AC141257.3-201ENST00000572906 215 ntBASIC3.89□□□□□ -1.79
CDH13P55290 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 MIR4637-201ENST00000582405 84 ntBASIC3.89□□□□□ -1.79
CDH13P55290 MIR5096-201ENST00000583713 70 ntBASIC3.89□□□□□ -1.79
CDH13P55290 MIR3138-201ENST00000585238 82 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH13P55290 AC112230.1-201ENST00000604342 547 ntBASIC3.89□□□□□ -1.79
CDH13P55290 IGHV3-29-201ENST00000604817 344 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC093424.1-201ENST00000604999 338 ntBASIC3.89□□□□□ -1.79
CDH13P55290 AC131235.4-201ENST00000609288 620 ntBASIC3.89□□□□□ -1.79
CDH13P55290 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH13P55290 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 AC116618.1-201ENST00000634617 774 ntBASIC3.89□□□□□ -1.79
CDH13P55290 MIR1322-201ENST00000638013 71 ntBASIC3.89□□□□□ -1.79
CDH13P55290 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH13P55290 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 AC005539.1-201ENST00000443768 1479 ntBASIC3.89□□□□□ -1.79
CDH13P55290 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH13P55290 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 MTCO1P23-201ENST00000415223 1526 ntBASIC3.89□□□□□ -1.79
CDH13P55290 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH13P55290 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH13P55290 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
CDH13P55290 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms