Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ETF1P3-201ENST00000430422 1160 ntBASIC3.47□□□□□ -1.85
CDH6P55285 ZFAND6P1-201ENST00000434138 605 ntBASIC3.47□□□□□ -1.85
CDH6P55285 RPL21P112-201ENST00000434403 463 ntBASIC3.47□□□□□ -1.85
CDH6P55285 FABP5P3-201ENST00000437960 408 ntBASIC3.47□□□□□ -1.85
CDH6P55285 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
CDH6P55285 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
CDH6P55285 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH6P55285 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH6P55285 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
CDH6P55285 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.47□□□□□ -1.85
CDH6P55285 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 MTCYBP28-201ENST00000566728 1132 ntBASIC3.47□□□□□ -1.85
CDH6P55285 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH6P55285 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 AC015917.1-201ENST00000579654 510 ntBASIC3.47□□□□□ -1.85
CDH6P55285 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.47□□□□□ -1.85
CDH6P55285 FRG1HP-204ENST00000617940 757 ntBASIC3.47□□□□□ -1.85
CDH6P55285 U73479.1-201ENST00000618062 168 ntBASIC3.47□□□□□ -1.85
CDH6P55285 AL356321.1-201ENST00000621360 228 ntBASIC3.47□□□□□ -1.85
CDH6P55285 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CDH6P55285 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
CDH6P55285 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CDH6P55285 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 RNU1-75P-201ENST00000347264 129 ntBASIC3.46□□□□□ -1.86
CDH6P55285 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 RNA5SP27-201ENST00000363839 119 ntBASIC3.46□□□□□ -1.86
CDH6P55285 SNORA7.2-201ENST00000364446 145 ntBASIC3.46□□□□□ -1.86
CDH6P55285 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH6P55285 AP000567.1-201ENST00000406413 156 ntBASIC3.46□□□□□ -1.86
CDH6P55285 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
CDH6P55285 RPS7P15-201ENST00000415804 584 ntBASIC3.46□□□□□ -1.86
CDH6P55285 LIPT1P1-201ENST00000415870 1186 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AC245052.5-201ENST00000416320 649 ntBASIC3.46□□□□□ -1.86
CDH6P55285 MTND2P16-201ENST00000419987 799 ntBASIC3.46□□□□□ -1.86
CDH6P55285 MTCYBP24-201ENST00000420387 1106 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AC069157.1-201ENST00000421749 137 ntBASIC3.46□□□□□ -1.86
CDH6P55285 MORF4L1P7-201ENST00000426038 703 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 PTP4A1P3-201ENST00000433661 420 ntBASIC3.46□□□□□ -1.86
CDH6P55285 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 YWHAZP8-201ENST00000436935 731 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 AL035407.2-201ENST00000454090 378 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH6P55285 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH6P55285 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH6P55285 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH6P55285 APOOP4-201ENST00000513530 597 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 MIR4504-201ENST00000577413 92 ntBASIC3.46□□□□□ -1.86
CDH6P55285 MIR5186-201ENST00000577504 120 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH6P55285 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH6P55285 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH6P55285 AC040174.2-201ENST00000602701 465 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AC008121.2-201ENST00000614647 523 ntBASIC3.46□□□□□ -1.86
CDH6P55285 AL355365.1-201ENST00000616480 294 ntBASIC3.46□□□□□ -1.86
CDH6P55285 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 SNORA50A-202ENST00000629536 136 ntBASIC3.46□□□□□ -1.86
CDH6P55285 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH6P55285 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH6P55285 ELL2P4-201ENST00000446870 1376 ntBASIC3.46□□□□□ -1.86
CDH6P55285 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH6P55285 ZNF542P-204ENST00000482727 1305 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH6P55285 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH6P55285 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDH6P55285 NPM1P10-201ENST00000398310 865 ntBASIC3.45□□□□□ -1.86
CDH6P55285 BX323014.1-201ENST00000412876 237 ntBASIC3.45□□□□□ -1.86
CDH6P55285 RPL31P2-201ENST00000413849 377 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH6P55285 HSFY4P-201ENST00000415994 1181 ntBASIC3.45□□□□□ -1.86
CDH6P55285 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 AC093422.3-201ENST00000428506 305 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 HMGB3P11-201ENST00000440127 604 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AL691517.1-201ENST00000440833 1235 ntBASIC3.45□□□□□ -1.86
CDH6P55285 RPS26P56-201ENST00000444468 240 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH6P55285 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH6P55285 PLGLA-201ENST00000465668 449 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms