Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 USP8P1-201ENST00000494673 3183 ntBASIC3.92□□□□□ -1.78
VCPP55072 TNPO1P3-201ENST00000436471 2662 ntBASIC3.92□□□□□ -1.78
VCPP55072 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCPP55072 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCPP55072 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VCPP55072 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCPP55072 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCPP55072 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VCPP55072 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCPP55072 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
VCPP55072 RNU6-543P-201ENST00000362576 108 ntBASIC3.91□□□□□ -1.78
VCPP55072 RNA5SP27-201ENST00000363839 119 ntBASIC3.91□□□□□ -1.78
VCPP55072 SNORA38.1-201ENST00000364172 131 ntBASIC3.91□□□□□ -1.78
VCPP55072 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCPP55072 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
VCPP55072 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.91□□□□□ -1.78
VCPP55072 AC073310.1-201ENST00000423226 1033 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.91□□□□□ -1.78
VCPP55072 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 HMGB1P48-201ENST00000446155 598 ntBASIC3.91□□□□□ -1.78
VCPP55072 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 BX276092.4-201ENST00000452056 248 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC073387.1-201ENST00000453261 709 ntBASIC3.91□□□□□ -1.78
VCPP55072 UBDP1-202ENST00000457888 382 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC008379.1-201ENST00000463655 464 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC078785.3-201ENST00000476607 425 ntBASIC3.91□□□□□ -1.78
VCPP55072 AL035404.1-201ENST00000497982 568 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC008494.2-201ENST00000514544 370 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 OR6C73P-201ENST00000546432 358 ntBASIC3.91□□□□□ -1.78
VCPP55072 NCAPGP2-201ENST00000557911 754 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VCPP55072 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 AC124283.4-201ENST00000581815 456 ntBASIC3.91□□□□□ -1.78
VCPP55072 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 AC012493.2-201ENST00000595083 291 ntBASIC3.91□□□□□ -1.78
VCPP55072 NTAN1P1-201ENST00000603150 646 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC005014.3-201ENST00000605985 190 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC016542.1-201ENST00000608259 493 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC112503.2-201ENST00000609005 552 ntBASIC3.91□□□□□ -1.78
VCPP55072 FRG1HP-204ENST00000617940 757 ntBASIC3.91□□□□□ -1.78
VCPP55072 AC132825.7-201ENST00000638744 335 ntBASIC3.91□□□□□ -1.78
VCPP55072 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VCPP55072 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.91□□□□□ -1.78
VCPP55072 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
VCPP55072 AL592494.2-201ENST00000425455 1548 ntBASIC3.9□□□□□ -1.78
VCPP55072 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.9□□□□□ -1.78
VCPP55072 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VCPP55072 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VCPP55072 RNA5SP432-201ENST00000362480 116 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC234772.1-201ENST00000377927 937 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC005300.1-201ENST00000428401 373 ntBASIC3.9□□□□□ -1.79
VCPP55072 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.9□□□□□ -1.79
VCPP55072 PSMA2P3-201ENST00000429685 675 ntBASIC3.9□□□□□ -1.79
VCPP55072 MOB1AP1-201ENST00000430903 535 ntBASIC3.9□□□□□ -1.79
VCPP55072 snoU13.7-201ENST00000459220 104 ntBASIC3.9□□□□□ -1.79
VCPP55072 RPL21P10-201ENST00000463521 490 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC104689.1-201ENST00000473356 768 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC025518.1-201ENST00000479856 347 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC104629.1-201ENST00000494226 508 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC069306.1-201ENST00000507006 843 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC005921.1-201ENST00000510589 286 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC008489.1-201ENST00000524271 483 ntBASIC3.9□□□□□ -1.79
VCPP55072 MTND5P21-201ENST00000531961 522 ntBASIC3.9□□□□□ -1.79
VCPP55072 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.9□□□□□ -1.79
VCPP55072 AC027104.1-201ENST00000563702 681 ntBASIC3.9□□□□□ -1.79
VCPP55072 ZNF192P1-203ENST00000565888 810 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.9□□□□□ -1.79
VCPP55072 TMF1P1-201ENST00000576058 373 ntBASIC3.9□□□□□ -1.79
VCPP55072 Z82195.1-201ENST00000604558 398 ntBASIC3.9□□□□□ -1.79
VCPP55072 YPEL5P2-201ENST00000605553 359 ntBASIC3.9□□□□□ -1.79
VCPP55072 SNORA62.6-201ENST00000606322 83 ntBASIC3.9□□□□□ -1.79
VCPP55072 AL354760.1-201ENST00000608357 643 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC073569.3-201ENST00000619055 682 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
VCPP55072 AP000943.4-201ENST00000622912 357 ntBASIC3.9□□□□□ -1.79
VCPP55072 AC068880.4-201ENST00000623082 495 ntBASIC3.9□□□□□ -1.79
VCPP55072 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.9□□□□□ -1.79
VCPP55072 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VCPP55072 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
VCPP55072 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VCPP55072 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.9□□□□□ -1.79
VCPP55072 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VCPP55072 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VCPP55072 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.89□□□□□ -1.79
VCPP55072 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VCPP55072 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VCPP55072 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VCPP55072 AP001148.1-201ENST00000624124 2359 ntBASIC3.89□□□□□ -1.79
VCPP55072 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VCPP55072 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VCPP55072 RNU1-33P-201ENST00000364249 162 ntBASIC3.89□□□□□ -1.79
VCPP55072 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VCPP55072 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.89□□□□□ -1.79
VCPP55072 HSPE1P26-201ENST00000405341 275 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.89□□□□□ -1.79
VCPP55072 OR51AB1P-201ENST00000429046 620 ntBASIC3.89□□□□□ -1.79
VCPP55072 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms