Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PMS1P54277 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PMS1P54277 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.5□□□□□ -1.53
PMS1P54277 FRG1BP-201ENST00000278882 761 ntBASIC5.5□□□□□ -1.53
PMS1P54277 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PMS1P54277 RNU6-28P-201ENST00000362378 107 ntBASIC5.5□□□□□ -1.53
PMS1P54277 RNA5SP391-201ENST00000363456 119 ntBASIC5.5□□□□□ -1.53
PMS1P54277 Y_RNA.159-201ENST00000363674 87 ntBASIC5.5□□□□□ -1.53
PMS1P54277 Y_RNA.263-201ENST00000364659 114 ntBASIC5.5□□□□□ -1.53
PMS1P54277 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.5□□□□□ -1.53
PMS1P54277 MIR1286-201ENST00000408112 78 ntBASIC5.5□□□□□ -1.53
PMS1P54277 RNA5SP296-201ENST00000410523 111 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC078974.1-201ENST00000411597 223 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 RPL6P29-201ENST00000414863 865 ntBASIC5.5□□□□□ -1.53
PMS1P54277 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 SNRPEP10-201ENST00000420249 274 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PMS1P54277 COX6CP15-201ENST00000426313 211 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.5□□□□□ -1.53
PMS1P54277 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 KNOP1P3-201ENST00000446933 426 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.5□□□□□ -1.53
PMS1P54277 SNRPGP6-201ENST00000451124 220 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC022364.2-201ENST00000457963 554 ntBASIC5.5□□□□□ -1.53
PMS1P54277 RPL36AP51-201ENST00000487216 318 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC093267.1-201ENST00000489176 961 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.5□□□□□ -1.53
PMS1P54277 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PMS1P54277 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.5□□□□□ -1.53
PMS1P54277 HIF1AP1-201ENST00000553642 175 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.5□□□□□ -1.53
PMS1P54277 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.5□□□□□ -1.53
PMS1P54277 MIR3176-201ENST00000582210 90 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AL353997.4-201ENST00000586196 166 ntBASIC5.5□□□□□ -1.53
PMS1P54277 NF1P5-201ENST00000588287 448 ntBASIC5.5□□□□□ -1.53
PMS1P54277 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.5□□□□□ -1.53
PMS1P54277 AC087283.1-201ENST00000604029 1074 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC007038.2-201ENST00000608095 740 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PMS1P54277 MTND4P23-201ENST00000447723 1363 ntBASIC5.5□□□□□ -1.53
PMS1P54277 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PMS1P54277 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PMS1P54277 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PMS1P54277 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
PMS1P54277 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PMS1P54277 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PMS1P54277 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PMS1P54277 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PMS1P54277 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.49□□□□□ -1.53
PMS1P54277 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PMS1P54277 OR5J1P-201ENST00000313544 939 ntBASIC5.49□□□□□ -1.53
PMS1P54277 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 RNU5E-1-201ENST00000362477 120 ntBASIC5.49□□□□□ -1.53
PMS1P54277 RNU6-456P-201ENST00000384493 107 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AL356421.1-201ENST00000403255 413 ntBASIC5.49□□□□□ -1.53
PMS1P54277 BTBD10P2-201ENST00000404779 676 ntBASIC5.49□□□□□ -1.53
PMS1P54277 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.49□□□□□ -1.53
PMS1P54277 AC019097.1-201ENST00000424783 735 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PMS1P54277 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.49□□□□□ -1.53
PMS1P54277 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 AP1S2P1-201ENST00000457344 379 ntBASIC5.49□□□□□ -1.53
PMS1P54277 RNU6-420P-201ENST00000458780 107 ntBASIC5.49□□□□□ -1.53
PMS1P54277 RPS26P39-201ENST00000469206 341 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AC097484.1-201ENST00000471148 389 ntBASIC5.49□□□□□ -1.53
PMS1P54277 OR2AO1P-201ENST00000476497 403 ntBASIC5.49□□□□□ -1.53
PMS1P54277 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 RPL7P39-201ENST00000481157 744 ntBASIC5.49□□□□□ -1.53
PMS1P54277 RN7SL809P-201ENST00000482040 297 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.49□□□□□ -1.53
PMS1P54277 AC011005.3-201ENST00000491624 395 ntBASIC5.49□□□□□ -1.53
PMS1P54277 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 TXNP6-201ENST00000510190 310 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 ENPP7P9-201ENST00000514456 627 ntBASIC5.49□□□□□ -1.53
PMS1P54277 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 RNA5SP43-201ENST00000516559 110 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.49□□□□□ -1.53
PMS1P54277 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 AC009117.1-201ENST00000563948 554 ntBASIC5.49□□□□□ -1.53
PMS1P54277 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.49□□□□□ -1.53
PMS1P54277 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.49□□□□□ -1.53
PMS1P54277 AC005261.5-201ENST00000596280 355 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms