Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 AL591416.1-201ENST00000404015 867 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 RNU6-985P-201ENST00000410182 104 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 RNU2-9P-201ENST00000410194 145 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 Y_RNA.615-201ENST00000410769 117 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 RN7SKP247-201ENST00000411094 308 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 RNU2-6P-201ENST00000411404 190 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 HMGB3P2-201ENST00000411913 584 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 RPS12P24-201ENST00000412619 387 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 SLC35E1P1-201ENST00000419313 864 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC008267.5-201ENST00000424928 265 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 SRIP2-201ENST00000428470 166 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 ATP5JP1-201ENST00000431631 322 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 TXNP5-201ENST00000441043 315 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 RPS24P13-201ENST00000442520 397 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 AC012512.1-201ENST00000446594 718 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 RPL37P3-201ENST00000456825 293 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC015724.1-201ENST00000478577 156 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC012181.1-201ENST00000479895 423 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 GAPDHP56-201ENST00000506031 988 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 PGAM1P13-201ENST00000507497 754 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.76□□□□□ -1.49
GRIK1P39086 SMURF2P1-201ENST00000514992 481 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 RNU6-988P-201ENST00000519081 107 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIK1P39086 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.76□□□□□ -1.49
GRIK1P39086 MYL12BP1-201ENST00000569826 507 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 AC211433.2-201ENST00000608433 387 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AC231657.1-201ENST00000624313 397 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 TAB3P1-202ENST00000452645 1634 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 MTND5P27-201ENST00000428871 1720 ntBASIC5.76□□□□□ -1.49
GRIK1P39086 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
GRIK1P39086 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.76□□□□□ -1.49
GRIK1P39086 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIK1P39086 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
GRIK1P39086 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 C4BPAP1-201ENST00000415474 1893 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GRIK1P39086 AC027228.2-201ENST00000567141 2154 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
GRIK1P39086 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 AC073343.1-201ENST00000328239 651 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 RNA5SP453-201ENST00000362503 119 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 RNU6-216P-201ENST00000363282 104 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 U3.10-201ENST00000364459 214 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 RNU6-769P-201ENST00000384407 104 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AL450992.3-201ENST00000413192 568 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIK1P39086 AL136133.1-201ENST00000413694 376 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 DUTP6-201ENST00000425573 462 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.75□□□□□ -1.49
GRIK1P39086 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIK1P39086 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.75□□□□□ -1.49
GRIK1P39086 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIK1P39086 MTCO1P27-201ENST00000448269 226 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 SLC31A1P1-201ENST00000451221 567 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 MRPS31P2-201ENST00000451581 518 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AZGP1P2-201ENST00000454506 345 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 MTCO3P10-201ENST00000455912 772 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIK1P39086 RN7SL188P-201ENST00000469842 285 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 RNU6-583P-201ENST00000516012 92 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIK1P39086 HMGB1P40-201ENST00000525121 540 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AC126177.5-201ENST00000549599 178 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 SULT1C2P2-201ENST00000562517 294 ntBASIC5.75□□□□□ -1.49
GRIK1P39086 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms