Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL18A1P39060 AP000873.5-201ENST00000533906 236 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 MTND2P17-201ENST00000550281 688 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 SNORD53-201ENST00000579969 78 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AL158827.2-201ENST00000602494 330 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AL691447.3-201ENST00000635020 330 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AC008264.2-201ENST00000610193 3731 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 U8.2-201ENST00000363156 134 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.56□□□□□ -1.84
COL18A1P39060 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 SETP10-201ENST00000424368 814 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 SRIP2-201ENST00000428470 166 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AL603825.1-201ENST00000438481 80 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AC016687.1-201ENST00000482574 353 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.56□□□□□ -1.84
COL18A1P39060 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.56□□□□□ -1.84
COL18A1P39060 AC009039.2-201ENST00000624524 529 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COL18A1P39060 AC107021.2-201ENST00000567714 2095 ntBASIC3.55□□□□□ -1.84
COL18A1P39060 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL18A1P39060 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL18A1P39060 SNORA3.2-201ENST00000408221 125 ntBASIC3.55□□□□□ -1.84
COL18A1P39060 AC245291.1-201ENST00000419501 328 ntBASIC3.55□□□□□ -1.84
COL18A1P39060 RPS20P22-201ENST00000473700 357 ntBASIC3.55□□□□□ -1.84
COL18A1P39060 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.55□□□□□ -1.84
COL18A1P39060 AC113430.1-201ENST00000506872 718 ntBASIC3.55□□□□□ -1.84
COL18A1P39060 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL18A1P39060 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.55□□□□□ -1.84
COL18A1P39060 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL18A1P39060 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.55□□□□□ -1.84
COL18A1P39060 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL18A1P39060 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
COL18A1P39060 RNU6-167P-201ENST00000384292 106 ntBASIC3.54□□□□□ -1.84
COL18A1P39060 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.54□□□□□ -1.84
COL18A1P39060 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL18A1P39060 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
COL18A1P39060 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.54□□□□□ -1.84
COL18A1P39060 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.54□□□□□ -1.84
COL18A1P39060 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.54□□□□□ -1.84
COL18A1P39060 IGKV3-31-201ENST00000523109 329 ntBASIC3.54□□□□□ -1.84
COL18A1P39060 AP001646.1-201ENST00000527936 915 ntBASIC3.54□□□□□ -1.84
COL18A1P39060 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.54□□□□□ -1.84
COL18A1P39060 AC087468.1-201ENST00000604365 630 ntBASIC3.54□□□□□ -1.84
COL18A1P39060 AP001005.3-201ENST00000622049 129 ntBASIC3.54□□□□□ -1.84
COL18A1P39060 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.54□□□□□ -1.84
COL18A1P39060 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.54□□□□□ -1.84
COL18A1P39060 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL18A1P39060 MIR423-201ENST00000362201 94 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL18A1P39060 RNA5SP107-201ENST00000411358 122 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 AL513477.1-202ENST00000417061 214 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 AC021205.1-201ENST00000468797 348 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AC098583.1-201ENST00000480875 255 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AC093663.2-201ENST00000484625 313 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.53□□□□□ -1.84
COL18A1P39060 AL137072.1-201ENST00000603444 466 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL18A1P39060 MIR764-201ENST00000390811 85 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 ATF1P1-201ENST00000406040 927 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 RN7SKP285-201ENST00000410137 318 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 RN7SKP247-201ENST00000411094 308 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 RAP1BP1-201ENST00000412709 553 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.53□□□□□ -1.84
COL18A1P39060 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 AC105402.2-201ENST00000438503 358 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AC104058.1-201ENST00000448028 297 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.53□□□□□ -1.84
COL18A1P39060 AC025423.2-201ENST00000537570 439 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AC122134.1-201ENST00000565664 1104 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.53□□□□□ -1.84
COL18A1P39060 AC090115.4-201ENST00000609970 188 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.53□□□□□ -1.84
COL18A1P39060 CUL4AP1-201ENST00000514750 1863 ntBASIC3.53□□□□□ -1.84
COL18A1P39060 AC109315.1-201ENST00000584143 1347 ntBASIC3.53□□□□□ -1.85
COL18A1P39060 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL18A1P39060 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.52□□□□□ -1.85
COL18A1P39060 AL049610.1-201ENST00000423374 372 ntBASIC3.52□□□□□ -1.85
COL18A1P39060 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.52□□□□□ -1.85
COL18A1P39060 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.52□□□□□ -1.85
COL18A1P39060 WASF1P1-201ENST00000447560 1131 ntBASIC3.52□□□□□ -1.85
COL18A1P39060 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.52□□□□□ -1.85
COL18A1P39060 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
COL18A1P39060 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.52□□□□□ -1.85
COL18A1P39060 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.52□□□□□ -1.85
COL18A1P39060 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.52□□□□□ -1.85
COL18A1P39060 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.52□□□□□ -1.85
COL18A1P39060 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.52□□□□□ -1.85
COL18A1P39060 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL18A1P39060 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL18A1P39060 AC016717.2-201ENST00000609089 5141 ntBASIC3.51□□□□□ -1.85
COL18A1P39060 SNORD62.1-201ENST00000362541 86 ntBASIC3.51□□□□□ -1.85
COL18A1P39060 MIR592-201ENST00000384959 97 ntBASIC3.51□□□□□ -1.85
COL18A1P39060 AL583834.1-201ENST00000406943 343 ntBASIC3.51□□□□□ -1.85
COL18A1P39060 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms