Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
RPA3P35244 OR5D17P-201ENST00000531492 978 ntBASIC3.16□□□□□ -1.9
RPA3P35244 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
RPA3P35244 CENPUP2-201ENST00000555897 1186 ntBASIC3.16□□□□□ -1.9
RPA3P35244 AC010928.3-201ENST00000587712 541 ntBASIC3.16□□□□□ -1.9
RPA3P35244 BNIP3P33-201ENST00000598912 569 ntBASIC3.16□□□□□ -1.9
RPA3P35244 SRGNP1-201ENST00000603392 451 ntBASIC3.16□□□□□ -1.9
RPA3P35244 AC103710.3-201ENST00000608157 948 ntBASIC3.16□□□□□ -1.9
RPA3P35244 MIR8058-201ENST00000615737 89 ntBASIC3.16□□□□□ -1.9
RPA3P35244 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.16□□□□□ -1.9
RPA3P35244 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.16□□□□□ -1.9
RPA3P35244 AC022031.1-201ENST00000585985 2593 ntBASIC3.16□□□□□ -1.9
RPA3P35244 AL353743.1-202ENST00000431724 1695 ntBASIC3.16□□□□□ -1.9
RPA3P35244 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RPA3P35244 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPA3P35244 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPA3P35244 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPA3P35244 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RPA3P35244 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPA3P35244 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RPA3P35244 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RPA3P35244 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPA3P35244 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RPA3P35244 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
RPA3P35244 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPA3P35244 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
RPA3P35244 HSPE1P26-201ENST00000405341 275 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AL158156.1-201ENST00000422509 473 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AL451062.2-201ENST00000427515 271 ntBASIC3.15□□□□□ -1.91
RPA3P35244 MRPS33P4-201ENST00000434892 317 ntBASIC3.15□□□□□ -1.91
RPA3P35244 RPL29P29-201ENST00000448725 423 ntBASIC3.15□□□□□ -1.91
RPA3P35244 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 AC090543.1-201ENST00000492168 485 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 RNU6-889P-201ENST00000517189 103 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 MTND5P21-201ENST00000531961 522 ntBASIC3.15□□□□□ -1.91
RPA3P35244 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 AC090751.1-201ENST00000566966 267 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AC055876.1-202ENST00000567053 138 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 MIR2682-201ENST00000580305 110 ntBASIC3.15□□□□□ -1.91
RPA3P35244 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
RPA3P35244 CKS1BP3-201ENST00000600888 237 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AC012531.5-201ENST00000611375 151 ntBASIC3.15□□□□□ -1.91
RPA3P35244 uc_338.25-201ENST00000613756 156 ntBASIC3.15□□□□□ -1.91
RPA3P35244 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RPA3P35244 AC004777.1-201ENST00000624317 287 ntBASIC3.15□□□□□ -1.91
RPA3P35244 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RPA3P35244 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RPA3P35244 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.15□□□□□ -1.91
RPA3P35244 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RPA3P35244 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.14□□□□□ -1.91
RPA3P35244 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 AC024341.1-201ENST00000526444 1552 ntBASIC3.14□□□□□ -1.91
RPA3P35244 AL157700.1-201ENST00000561973 1432 ntBASIC3.14□□□□□ -1.91
RPA3P35244 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 SNORA51.4-201ENST00000364993 124 ntBASIC3.14□□□□□ -1.91
RPA3P35244 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 MIR1303-201ENST00000408625 86 ntBASIC3.14□□□□□ -1.91
RPA3P35244 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
RPA3P35244 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.14□□□□□ -1.91
RPA3P35244 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC006028.1-201ENST00000438379 402 ntBASIC3.14□□□□□ -1.91
RPA3P35244 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC069540.1-201ENST00000446320 988 ntBASIC3.14□□□□□ -1.91
RPA3P35244 BX276092.4-201ENST00000452056 248 ntBASIC3.14□□□□□ -1.91
RPA3P35244 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.14□□□□□ -1.91
RPA3P35244 TMED11P-201ENST00000479478 690 ntBASIC3.14□□□□□ -1.91
RPA3P35244 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.14□□□□□ -1.91
RPA3P35244 HSPD1P15-201ENST00000505573 1122 ntBASIC3.14□□□□□ -1.91
RPA3P35244 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.14□□□□□ -1.91
RPA3P35244 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.14□□□□□ -1.91
RPA3P35244 AL159169.3-201ENST00000608871 561 ntBASIC3.14□□□□□ -1.91
RPA3P35244 AC009464.1-201ENST00000615731 469 ntBASIC3.14□□□□□ -1.91
RPA3P35244 FAM157B-203ENST00000639350 358 ntBASIC3.14□□□□□ -1.91
RPA3P35244 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RPA3P35244 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RPA3P35244 MTND5P1-201ENST00000445440 1375 ntBASIC3.13□□□□□ -1.91
RPA3P35244 AL133383.2-201ENST00000622958 2336 ntBASIC3.13□□□□□ -1.91
RPA3P35244 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPA3P35244 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPA3P35244 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RPA3P35244 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RPA3P35244 SNORA31-201ENST00000362607 130 ntBASIC3.13□□□□□ -1.91
RPA3P35244 RN7SKP58-201ENST00000411010 305 ntBASIC3.13□□□□□ -1.91
RPA3P35244 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.13□□□□□ -1.91
RPA3P35244 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms