Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RMST_8.1-201ENST00000610287 165 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC068880.4-201ENST00000623082 495 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA3P32297 MIR4278-201ENST00000636094 69 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 AL355578.1-201ENST00000607405 1328 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 SGO1P1-201ENST00000603525 1447 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.83□□□□□ -1.8
CHRNA3P32297 ZNF285B-201ENST00000561698 1767 ntBASIC3.83□□□□□ -1.8
CHRNA3P32297 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHRNA3P32297 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
CHRNA3P32297 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CHRNA3P32297 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CHRNA3P32297 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 RNA5SP235-201ENST00000365411 114 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 RNU6-441P-201ENST00000384545 106 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CHRNA3P32297 RN7SKP285-201ENST00000410137 318 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 RPL21P112-201ENST00000434403 463 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 NCOR1P1-202ENST00000486162 291 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 HMGN1P11-201ENST00000508668 303 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AC112198.4-201ENST00000515450 351 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 RNU6-1231P-201ENST00000517185 103 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 OR7E13P-201ENST00000526052 910 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 TRAV15-201ENST00000556680 249 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AGGF1P8-201ENST00000562979 1000 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 SNRPGP15-201ENST00000600149 222 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 MTATP6P2-201ENST00000603319 678 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 MIR92B-201ENST00000607575 96 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 AC093875.1-201ENST00000623688 504 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AC112200.1-201ENST00000625015 234 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 AL590396.4-201ENST00000636779 956 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.82□□□□□ -1.8
CHRNA3P32297 OR8B1P-202ENST00000641132 1178 ntBASIC3.82□□□□□ -1.8
CHRNA3P32297 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CHRNA3P32297 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHRNA3P32297 PWAR6-201ENST00000552334 4618 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 ZNF734P-201ENST00000419494 1534 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 USP8P1-201ENST00000494673 3183 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA3P32297 RNU6-335P-201ENST00000364563 113 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 MIR670-201ENST00000390142 98 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHRNA3P32297 RPL21P17-201ENST00000397467 475 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL121972.1-201ENST00000402023 252 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 MIR1183-201ENST00000408856 89 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AL389915.1-201ENST00000422463 466 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL354692.1-201ENST00000423044 315 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA3P32297 RPP40P1-201ENST00000426762 456 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA3P32297 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC114973.1-201ENST00000429057 632 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA3P32297 VN1R34P-201ENST00000447387 883 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AL050341.1-201ENST00000447743 313 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.81□□□□□ -1.8
CHRNA3P32297 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.81□□□□□ -1.8
CHRNA3P32297 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 FCF1P6-201ENST00000456841 595 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 UBDP1-202ENST00000457888 382 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.81□□□□□ -1.8
CHRNA3P32297 SYPL1P1-201ENST00000473622 768 ntBASIC3.81□□□□□ -1.8
CHRNA3P32297 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms