Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL121890.1-201ENST00000435457 205 ntBASIC4.27□□□□□ -1.73
CLIP1P30622 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.27□□□□□ -1.73
CLIP1P30622 AP000857.1-201ENST00000532151 543 ntBASIC4.27□□□□□ -1.73
CLIP1P30622 AC106734.1-201ENST00000568646 663 ntBASIC4.27□□□□□ -1.73
CLIP1P30622 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.27□□□□□ -1.73
CLIP1P30622 AC104984.5-201ENST00000586878 94 ntBASIC4.27□□□□□ -1.73
CLIP1P30622 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.27□□□□□ -1.73
CLIP1P30622 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.27□□□□□ -1.73
CLIP1P30622 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP1P30622 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP1P30622 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.27□□□□□ -1.73
CLIP1P30622 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP1P30622 AC019155.1-201ENST00000382242 574 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 YPEL5P1-201ENST00000419731 367 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP1P30622 CACYBPP2-201ENST00000453625 678 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.26□□□□□ -1.73
CLIP1P30622 COX6B1P6-201ENST00000522347 255 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 PDCL2P2-201ENST00000533651 189 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 AL133271.1-201ENST00000538229 291 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.26□□□□□ -1.73
CLIP1P30622 EIF5A2P1-201ENST00000564027 460 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.26□□□□□ -1.73
CLIP1P30622 CR381653.2-201ENST00000624041 768 ntBASIC4.26□□□□□ -1.73
CLIP1P30622 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.26□□□□□ -1.73
CLIP1P30622 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP1P30622 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP1P30622 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLIP1P30622 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLIP1P30622 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP1P30622 RPL9P7-201ENST00000330965 580 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 RSL24D1P4-201ENST00000400938 484 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP1P30622 NECAP1P2-201ENST00000455668 727 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 RNA5SP380-201ENST00000517190 98 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 AC107918.3-201ENST00000533272 382 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 SERPINE4P-201ENST00000554978 281 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP1P30622 AL355836.1-201ENST00000555951 870 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP1P30622 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP1P30622 MIR4635-201ENST00000583759 79 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 AC008277.2-201ENST00000605196 797 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 AC092608.2-201ENST00000624427 218 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLIP1P30622 AC093311.1-201ENST00000506586 2021 ntBASIC4.25□□□□□ -1.73
CLIP1P30622 AL021368.2-201ENST00000606125 5352 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP1P30622 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP1P30622 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CLIP1P30622 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP1P30622 SRIP1-201ENST00000489235 288 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP1P30622 AP003102.1-201ENST00000525638 661 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 AC243972.3-201ENST00000539655 198 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 AL109741.3-201ENST00000561748 592 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP1P30622 AC112503.1-201ENST00000608436 391 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP1P30622 AL590808.1-201ENST00000618696 141 ntBASIC4.24□□□□□ -1.73
CLIP1P30622 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP1P30622 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP1P30622 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP1P30622 AL355379.1-201ENST00000405542 640 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP1P30622 BMS1P22-201ENST00000414726 313 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.23□□□□□ -1.73
CLIP1P30622 AL357520.1-201ENST00000441557 453 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 AL590399.6-201ENST00000446396 307 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 AC093663.2-201ENST00000484625 313 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 AC104687.1-201ENST00000485829 412 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLIP1P30622 AL358913.1-201ENST00000554342 121 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP1P30622 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.23□□□□□ -1.73
CLIP1P30622 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.22□□□□□ -1.73
CLIP1P30622 MIR1261-201ENST00000408659 82 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 RNA5SP508-201ENST00000411327 119 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP1P30622 FTH1P6-201ENST00000430768 320 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 MYL8P-204ENST00000431574 518 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 AL662791.1-201ENST00000441992 928 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.22□□□□□ -1.73
CLIP1P30622 AC011037.1-201ENST00000483964 558 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLIP1P30622 HMGB3P26-201ENST00000560051 582 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 AL450489.1-201ENST00000612071 468 ntBASIC4.22□□□□□ -1.73
CLIP1P30622 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP1P30622 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLIP1P30622 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLIP1P30622 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.21□□□□□ -1.73
CLIP1P30622 AL356806.1-201ENST00000422524 916 ntBASIC4.21□□□□□ -1.73
CLIP1P30622 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.21□□□□□ -1.73
CLIP1P30622 MRPL50P4-201ENST00000446432 475 ntBASIC4.21□□□□□ -1.73
CLIP1P30622 RN7SL330P-201ENST00000469709 307 ntBASIC4.21□□□□□ -1.73
CLIP1P30622 AC016687.1-201ENST00000482574 353 ntBASIC4.21□□□□□ -1.73
CLIP1P30622 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.21□□□□□ -1.73
CLIP1P30622 RNU1-41P-201ENST00000516161 162 ntBASIC4.21□□□□□ -1.73
CLIP1P30622 RNU1-48P-201ENST00000516400 162 ntBASIC4.21□□□□□ -1.73
CLIP1P30622 AP002812.4-201ENST00000532139 286 ntBASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms