Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.39□□□□□ -1.71
BDNFP23560 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 AC116667.1-201ENST00000604855 2072 ntBASIC4.39□□□□□ -1.71
BDNFP23560 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
BDNFP23560 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BDNFP23560 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
BDNFP23560 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BDNFP23560 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
BDNFP23560 RNA5SP283-201ENST00000365604 119 ntBASIC4.38□□□□□ -1.71
BDNFP23560 SNRPEP2-201ENST00000397592 279 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL049610.1-201ENST00000423374 372 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC019178.2-201ENST00000423595 505 ntBASIC4.38□□□□□ -1.71
BDNFP23560 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL117339.2-201ENST00000430475 180 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 MTND4P6-201ENST00000438297 472 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC006011.1-201ENST00000442758 349 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL358794.1-201ENST00000445689 381 ntBASIC4.38□□□□□ -1.71
BDNFP23560 RPL39P6-201ENST00000448289 150 ntBASIC4.38□□□□□ -1.71
BDNFP23560 MTCO3P11-201ENST00000455103 774 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
BDNFP23560 AC026410.2-201ENST00000460281 156 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL049830.2-201ENST00000480072 201 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC114981.1-201ENST00000503897 678 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BDNFP23560 AC026402.1-201ENST00000513642 170 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 RNU6-1225P-201ENST00000516336 65 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BDNFP23560 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.38□□□□□ -1.71
BDNFP23560 AC063950.1-201ENST00000552036 308 ntBASIC4.38□□□□□ -1.71
BDNFP23560 HSPE1P3-201ENST00000559254 309 ntBASIC4.38□□□□□ -1.71
BDNFP23560 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 MIR4474-201ENST00000579189 78 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.38□□□□□ -1.71
BDNFP23560 MIR4637-201ENST00000582405 84 ntBASIC4.38□□□□□ -1.71
BDNFP23560 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 VN1R85P-201ENST00000601587 426 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL451044.1-201ENST00000604867 238 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC097504.2-201ENST00000608088 454 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AL391497.1-201ENST00000608671 547 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC009237.15-201ENST00000610252 501 ntBASIC4.38□□□□□ -1.71
BDNFP23560 AC104763.3-201ENST00000613765 618 ntBASIC4.38□□□□□ -1.71
BDNFP23560 PLCE1P1-201ENST00000622094 305 ntBASIC4.38□□□□□ -1.71
BDNFP23560 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.38□□□□□ -1.71
BDNFP23560 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.38□□□□□ -1.71
BDNFP23560 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BDNFP23560 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BDNFP23560 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
BDNFP23560 AC118273.1-201ENST00000525324 3006 ntBASIC4.38□□□□□ -1.71
BDNFP23560 Z82217.1-201ENST00000625157 8149 ntBASIC4.38□□□□□ -1.71
BDNFP23560 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
BDNFP23560 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 snoZ40.1-201ENST00000364540 72 ntBASIC4.37□□□□□ -1.71
BDNFP23560 RPL21P65-201ENST00000406094 466 ntBASIC4.37□□□□□ -1.71
BDNFP23560 RNU2-42P-201ENST00000410697 113 ntBASIC4.37□□□□□ -1.71
BDNFP23560 RN7SKP53-201ENST00000411337 315 ntBASIC4.37□□□□□ -1.71
BDNFP23560 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.37□□□□□ -1.71
BDNFP23560 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.37□□□□□ -1.71
BDNFP23560 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 PDSS1P1-201ENST00000422953 1114 ntBASIC4.37□□□□□ -1.71
BDNFP23560 PSMA6P3-201ENST00000428242 164 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.37□□□□□ -1.71
BDNFP23560 MUPP-201ENST00000438111 566 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.37□□□□□ -1.71
BDNFP23560 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
BDNFP23560 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 HSPA8P13-201ENST00000523715 472 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AP001804.3-201ENST00000525146 880 ntBASIC4.37□□□□□ -1.71
BDNFP23560 HIGD1AP10-201ENST00000527837 282 ntBASIC4.37□□□□□ -1.71
BDNFP23560 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.37□□□□□ -1.71
BDNFP23560 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 OR8R1P-201ENST00000543943 764 ntBASIC4.37□□□□□ -1.71
BDNFP23560 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 AC053481.3-201ENST00000577881 843 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.37□□□□□ -1.71
BDNFP23560 AC245036.5-201ENST00000596330 847 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AC024941.1-201ENST00000612250 334 ntBASIC4.37□□□□□ -1.71
BDNFP23560 MIR8058-201ENST00000615737 89 ntBASIC4.37□□□□□ -1.71
BDNFP23560 MIR7151-201ENST00000617477 60 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AL356585.4-201ENST00000623078 1229 ntBASIC4.37□□□□□ -1.71
BDNFP23560 AC055839.1-201ENST00000634467 498 ntBASIC4.37□□□□□ -1.71
BDNFP23560 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BDNFP23560 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
BDNFP23560 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
BDNFP23560 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms