Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 RPL21P99-201ENST00000480369 423 ntBASIC5.04□□□□□ -1.6
ATF4P18848 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 RN7SL649P-201ENST00000496974 275 ntBASIC5.04□□□□□ -1.6
ATF4P18848 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 AF186190.1-201ENST00000517470 480 ntBASIC5.04□□□□□ -1.6
ATF4P18848 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATF4P18848 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 MTND4P7-201ENST00000523876 130 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC023050.3-201ENST00000541142 333 ntBASIC5.04□□□□□ -1.6
ATF4P18848 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.04□□□□□ -1.6
ATF4P18848 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 FAM60BP-201ENST00000578364 658 ntBASIC5.04□□□□□ -1.6
ATF4P18848 MIR4312-201ENST00000579909 76 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 AC233702.9-201ENST00000581528 203 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC174048.1-201ENST00000603389 144 ntBASIC5.04□□□□□ -1.6
ATF4P18848 C8orf59P2-201ENST00000603441 271 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AL031320.1-201ENST00000604177 357 ntBASIC5.04□□□□□ -1.6
ATF4P18848 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 MRPL57P1-201ENST00000621486 265 ntBASIC5.04□□□□□ -1.6
ATF4P18848 MIR6813-201ENST00000621638 56 ntBASIC5.04□□□□□ -1.6
ATF4P18848 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.04□□□□□ -1.6
ATF4P18848 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ATF4P18848 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
ATF4P18848 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATF4P18848 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
ATF4P18848 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.03□□□□□ -1.6
ATF4P18848 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ATF4P18848 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 RN7SKP191-201ENST00000364713 306 ntBASIC5.03□□□□□ -1.6
ATF4P18848 RN7SKP6-201ENST00000364795 319 ntBASIC5.03□□□□□ -1.6
ATF4P18848 SMIM11P1-201ENST00000369586 178 ntBASIC5.03□□□□□ -1.6
ATF4P18848 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
ATF4P18848 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 RNU6-1279P-201ENST00000383917 103 ntBASIC5.03□□□□□ -1.6
ATF4P18848 DUTP5-201ENST00000406790 469 ntBASIC5.03□□□□□ -1.6
ATF4P18848 MIR1266-201ENST00000408125 84 ntBASIC5.03□□□□□ -1.6
ATF4P18848 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.03□□□□□ -1.6
ATF4P18848 RNU4-46P-201ENST00000410818 138 ntBASIC5.03□□□□□ -1.6
ATF4P18848 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF4P18848 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF4P18848 CHEK2P3-201ENST00000416118 248 ntBASIC5.03□□□□□ -1.6
ATF4P18848 EI24P1-201ENST00000416584 867 ntBASIC5.03□□□□□ -1.6
ATF4P18848 FAM183DP-201ENST00000421987 399 ntBASIC5.03□□□□□ -1.6
ATF4P18848 PTPN2P1-201ENST00000423212 1072 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AL662874.1-201ENST00000426065 230 ntBASIC5.03□□□□□ -1.6
ATF4P18848 MTCO1P39-201ENST00000426148 480 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AC008850.1-201ENST00000427546 362 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AL365400.1-201ENST00000431854 640 ntBASIC5.03□□□□□ -1.6
ATF4P18848 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF4P18848 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
ATF4P18848 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.03□□□□□ -1.6
ATF4P18848 RPS18P1-201ENST00000447840 458 ntBASIC5.03□□□□□ -1.6
ATF4P18848 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF4P18848 SNX18P26-201ENST00000458433 740 ntBASIC5.03□□□□□ -1.6
ATF4P18848 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF4P18848 AC007547.1-201ENST00000462177 490 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AP000942.1-201ENST00000463969 747 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF4P18848 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 RN7SL655P-201ENST00000486087 298 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AC008945.1-201ENST00000505144 499 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AL390198.2-201ENST00000510553 222 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.03□□□□□ -1.6
ATF4P18848 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.03□□□□□ -1.6
ATF4P18848 RNU6-352P-201ENST00000516908 107 ntBASIC5.03□□□□□ -1.6
ATF4P18848 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.03□□□□□ -1.6
ATF4P18848 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATF4P18848 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 RPL23AP84-201ENST00000571193 464 ntBASIC5.03□□□□□ -1.6
ATF4P18848 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.03□□□□□ -1.6
ATF4P18848 AL117336.2-201ENST00000602435 335 ntBASIC5.03□□□□□ -1.6
ATF4P18848 RPS4XP21-201ENST00000603814 750 ntBASIC5.03□□□□□ -1.6
ATF4P18848 RNU6-89P-201ENST00000606519 100 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms