Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.09□□□□□ -1.59
COL6A2P12110 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.09□□□□□ -1.59
COL6A2P12110 MIR4504-201ENST00000577413 92 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 AP005119.2-201ENST00000579735 1105 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 MIR3118-1-201ENST00000581787 76 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.09□□□□□ -1.59
COL6A2P12110 NF1P5-201ENST00000588287 448 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 AC087045.1-201ENST00000605856 382 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 AC116447.1-201ENST00000613153 453 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 MIR6864-201ENST00000617935 70 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 AC015914.2-201ENST00000618167 288 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 MIR3662-201ENST00000637030 95 ntBASIC5.09□□□□□ -1.59
COL6A2P12110 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL6A2P12110 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
COL6A2P12110 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL6A2P12110 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
COL6A2P12110 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL6A2P12110 AP000756.2-201ENST00000624168 2567 ntBASIC5.09□□□□□ -1.6
COL6A2P12110 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.08□□□□□ -1.6
COL6A2P12110 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 OR5J1P-201ENST00000313544 939 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 RNA5SP391-201ENST00000363456 119 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 RNU4-1-201ENST00000363925 141 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 RNU1-39P-201ENST00000383897 165 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 RNU6-1226P-201ENST00000384317 107 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 MT-TD-201ENST00000387419 68 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC073136.2-201ENST00000417282 849 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 SLC35E1P1-201ENST00000419313 864 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AL358176.3-201ENST00000420757 454 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AL353193.1-201ENST00000421444 268 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC099336.2-201ENST00000422457 254 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 COX6CP15-201ENST00000426313 211 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC012075.1-201ENST00000436549 580 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 MTND6P18-201ENST00000439477 513 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.08□□□□□ -1.6
COL6A2P12110 AC005297.2-201ENST00000450430 606 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 EIF4A1P11-201ENST00000451239 222 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC099560.2-201ENST00000457554 255 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC079382.1-201ENST00000493346 557 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.08□□□□□ -1.6
COL6A2P12110 FTH1P24-201ENST00000503502 462 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC018710.1-201ENST00000506509 158 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 MTND3P22-201ENST00000510932 243 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC025465.4-201ENST00000513422 638 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.08□□□□□ -1.6
COL6A2P12110 OR5BC1P-201ENST00000529327 739 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.08□□□□□ -1.6
COL6A2P12110 GLYCAM1-201ENST00000546596 285 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.08□□□□□ -1.6
COL6A2P12110 AC123904.2-201ENST00000548059 300 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.08□□□□□ -1.6
COL6A2P12110 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.08□□□□□ -1.6
COL6A2P12110 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.08□□□□□ -1.6
COL6A2P12110 SNORD95-201ENST00000579879 68 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.08□□□□□ -1.6
COL6A2P12110 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 AC005261.5-201ENST00000596280 355 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC007621.1-201ENST00000604544 437 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AL445222.1-201ENST00000607259 628 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 RNU4-89P-201ENST00000607443 133 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC093788.1-201ENST00000609356 927 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 TUG1_1.1-201ENST00000610654 145 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 AC109309.2-201ENST00000612597 332 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 AC126323.6-202ENST00000568092 3511 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 NUP58P1-201ENST00000502546 1738 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL6A2P12110 AL592148.3-201ENST00000608771 2646 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.08□□□□□ -1.6
COL6A2P12110 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL6A2P12110 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL6A2P12110 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL6A2P12110 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.07□□□□□ -1.6
COL6A2P12110 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.07□□□□□ -1.6
COL6A2P12110 MTND4P23-201ENST00000447723 1363 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL6A2P12110 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.07□□□□□ -1.6
COL6A2P12110 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
COL6A2P12110 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms