Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.57□□□□□ -1.68
TOP2AP11388 RPS29P21-201ENST00000496272 170 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 DYNLL1P6-201ENST00000503440 264 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 AC018797.3-201ENST00000513388 1241 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.57□□□□□ -1.68
TOP2AP11388 AC068657.1-201ENST00000520807 306 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.57□□□□□ -1.68
TOP2AP11388 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.57□□□□□ -1.68
TOP2AP11388 AL355836.1-201ENST00000555951 870 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 AC022069.1-201ENST00000582910 658 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 AC241377.1-201ENST00000619797 406 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 CR381653.2-201ENST00000624041 768 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 AC063923.1-201ENST00000478982 1619 ntBASIC4.57□□□□□ -1.68
TOP2AP11388 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.57□□□□□ -1.68
TOP2AP11388 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TOP2AP11388 RNA5SP502-201ENST00000362694 119 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 RPLP0P7-201ENST00000416050 667 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP2AP11388 OR6K1P-201ENST00000456766 971 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP2AP11388 AL391156.1-201ENST00000554965 554 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP2AP11388 AL020991.1-201ENST00000612314 373 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP2AP11388 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP2AP11388 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TOP2AP11388 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TOP2AP11388 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP2AP11388 PRELID3BP7-201ENST00000503606 469 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.56□□□□□ -1.68
TOP2AP11388 VWA8P1-201ENST00000510889 176 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 RNU6-237P-201ENST00000515985 71 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 AC100870.1-201ENST00000522035 505 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 MIR4769-201ENST00000584126 77 ntBASIC4.56□□□□□ -1.68
TOP2AP11388 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
TOP2AP11388 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TOP2AP11388 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
TOP2AP11388 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TOP2AP11388 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP2AP11388 AMD1P2-201ENST00000412936 992 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 AL592437.1-201ENST00000443781 492 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TOP2AP11388 AC010468.1-201ENST00000461022 817 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 AC118282.1-201ENST00000506408 765 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 AC119751.1-201ENST00000513357 765 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.55□□□□□ -1.68
TOP2AP11388 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.55□□□□□ -1.68
TOP2AP11388 AP002770.2-201ENST00000543613 532 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.55□□□□□ -1.68
TOP2AP11388 AC025946.2-201ENST00000603398 234 ntBASIC4.55□□□□□ -1.68
TOP2AP11388 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TOP2AP11388 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.55□□□□□ -1.68
TOP2AP11388 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TOP2AP11388 AC006020.1-201ENST00000420179 1854 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TOP2AP11388 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP2AP11388 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TOP2AP11388 MIR27B-201ENST00000385129 97 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 MIR708-201ENST00000390708 88 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TOP2AP11388 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.54□□□□□ -1.68
TOP2AP11388 snoU13.26-201ENST00000459452 105 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.54□□□□□ -1.68
TOP2AP11388 OR5H5P-201ENST00000503164 928 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP2AP11388 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.54□□□□□ -1.68
TOP2AP11388 VN1R78P-201ENST00000597393 564 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TOP2AP11388 LINC01355-201ENST00000566551 5444 ntBASIC4.54□□□□□ -1.68
TOP2AP11388 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOP2AP11388 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOP2AP11388 AC080125.1-201ENST00000414888 684 ntBASIC4.53□□□□□ -1.68
TOP2AP11388 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP2AP11388 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP2AP11388 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOP2AP11388 SEPT7P3-201ENST00000455017 621 ntBASIC4.53□□□□□ -1.68
TOP2AP11388 snoU13.15-201ENST00000459407 104 ntBASIC4.53□□□□□ -1.68
TOP2AP11388 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP2AP11388 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP2AP11388 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP2AP11388 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC4.53□□□□□ -1.68
TOP2AP11388 AC138915.3-201ENST00000562908 1389 ntBASIC4.53□□□□□ -1.68
TOP2AP11388 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOP2AP11388 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.52□□□□□ -1.69
TOP2AP11388 U8.2-201ENST00000363156 134 ntBASIC4.52□□□□□ -1.69
TOP2AP11388 RPL23AP48-201ENST00000406913 488 ntBASIC4.52□□□□□ -1.69
TOP2AP11388 RAC1P3-201ENST00000416129 580 ntBASIC4.52□□□□□ -1.69
TOP2AP11388 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TOP2AP11388 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP2AP11388 AC234781.5-201ENST00000508429 271 ntBASIC4.52□□□□□ -1.69
TOP2AP11388 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.52□□□□□ -1.69
TOP2AP11388 Z99129.2-201ENST00000619967 314 ntBASIC4.52□□□□□ -1.69
TOP2AP11388 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.52□□□□□ -1.69
TOP2AP11388 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP2AP11388 AC092013.1-201ENST00000438795 332 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 RN7SKP24-201ENST00000515888 284 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 AC083760.1-201ENST00000589621 670 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TOP2AP11388 TTC39DP-201ENST00000416781 1688 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms