Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 USP9YP22-201ENST00000438971 294 ntBASIC3.87□□□□□ -1.79
CD48P09326 KATNBL1P3-201ENST00000443475 909 ntBASIC3.87□□□□□ -1.79
CD48P09326 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.87□□□□□ -1.79
CD48P09326 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 RPL23AP12-201ENST00000467573 473 ntBASIC3.87□□□□□ -1.79
CD48P09326 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 AC093853.1-201ENST00000515689 483 ntBASIC3.87□□□□□ -1.79
CD48P09326 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
CD48P09326 RN7SKP209-201ENST00000516888 304 ntBASIC3.87□□□□□ -1.79
CD48P09326 MIR2116-201ENST00000517221 80 ntBASIC3.87□□□□□ -1.79
CD48P09326 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.87□□□□□ -1.79
CD48P09326 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 AC007991.1-201ENST00000522680 631 ntBASIC3.87□□□□□ -1.79
CD48P09326 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.87□□□□□ -1.79
CD48P09326 OR4C2P-201ENST00000530855 1064 ntBASIC3.87□□□□□ -1.79
CD48P09326 AP001317.1-201ENST00000531194 960 ntBASIC3.87□□□□□ -1.79
CD48P09326 AL356057.1-201ENST00000533798 831 ntBASIC3.87□□□□□ -1.79
CD48P09326 AP000619.3-201ENST00000535634 1127 ntBASIC3.87□□□□□ -1.79
CD48P09326 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.87□□□□□ -1.79
CD48P09326 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CD48P09326 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 HMGB3P26-201ENST00000560051 582 ntBASIC3.87□□□□□ -1.79
CD48P09326 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 BPTFP1-201ENST00000579209 492 ntBASIC3.87□□□□□ -1.79
CD48P09326 AL133507.1-201ENST00000605269 557 ntBASIC3.87□□□□□ -1.79
CD48P09326 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
CD48P09326 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
CD48P09326 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CD48P09326 AC068831.8-201ENST00000620171 435 ntBASIC3.87□□□□□ -1.79
CD48P09326 AC068724.3-201ENST00000625906 87 ntBASIC3.87□□□□□ -1.79
CD48P09326 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.87□□□□□ -1.79
CD48P09326 MIR4278-201ENST00000636094 69 ntBASIC3.87□□□□□ -1.79
CD48P09326 AC007671.2-201ENST00000637344 619 ntBASIC3.87□□□□□ -1.79
CD48P09326 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD48P09326 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CD48P09326 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CD48P09326 AC024560.2-201ENST00000507981 1497 ntBASIC3.86□□□□□ -1.79
CD48P09326 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CD48P09326 RNA5SP424-201ENST00000390988 115 ntBASIC3.86□□□□□ -1.79
CD48P09326 OR51A3P-201ENST00000413596 924 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC127526.1-201ENST00000417526 366 ntBASIC3.86□□□□□ -1.79
CD48P09326 AL365203.2-201ENST00000423444 196 ntBASIC3.86□□□□□ -1.79
CD48P09326 MTND4P20-201ENST00000424125 869 ntBASIC3.86□□□□□ -1.79
CD48P09326 BMS1P19-201ENST00000433925 393 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.86□□□□□ -1.79
CD48P09326 YWHAZP7-201ENST00000436906 631 ntBASIC3.86□□□□□ -1.79
CD48P09326 CBX1P4-201ENST00000439415 457 ntBASIC3.86□□□□□ -1.79
CD48P09326 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.86□□□□□ -1.79
CD48P09326 DNAJC19P1-201ENST00000455312 319 ntBASIC3.86□□□□□ -1.79
CD48P09326 RPL5P24-201ENST00000463742 885 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC091153.1-201ENST00000466297 402 ntBASIC3.86□□□□□ -1.79
CD48P09326 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.86□□□□□ -1.79
CD48P09326 GAPDHP36-201ENST00000480688 918 ntBASIC3.86□□□□□ -1.79
CD48P09326 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.86□□□□□ -1.79
CD48P09326 MTND1P22-201ENST00000510572 951 ntBASIC3.86□□□□□ -1.79
CD48P09326 RN7SKP21-201ENST00000516503 220 ntBASIC3.86□□□□□ -1.79
CD48P09326 HMGB1P23-201ENST00000518743 568 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC018442.3-201ENST00000523025 183 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 DUXAP1-201ENST00000556632 463 ntBASIC3.86□□□□□ -1.79
CD48P09326 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.86□□□□□ -1.79
CD48P09326 AC006960.3-201ENST00000561845 705 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC080013.3-201ENST00000606839 578 ntBASIC3.86□□□□□ -1.79
CD48P09326 AL451064.1-201ENST00000607718 471 ntBASIC3.86□□□□□ -1.79
CD48P09326 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 AC105227.2-201ENST00000615075 605 ntBASIC3.86□□□□□ -1.79
CD48P09326 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.86□□□□□ -1.79
CD48P09326 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.86□□□□□ -1.79
CD48P09326 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CD48P09326 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CD48P09326 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.86□□□□□ -1.79
CD48P09326 CR381670.1-201ENST00000624291 1693 ntBASIC3.86□□□□□ -1.79
CD48P09326 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.86□□□□□ -1.79
CD48P09326 HSPA8P17-201ENST00000427029 1382 ntBASIC3.86□□□□□ -1.79
CD48P09326 AC096656.1-201ENST00000623826 1364 ntBASIC3.86□□□□□ -1.79
CD48P09326 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD48P09326 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.86□□□□□ -1.79
CD48P09326 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
CD48P09326 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CD48P09326 AC092079.1-201ENST00000558620 1985 ntBASIC3.85□□□□□ -1.79
CD48P09326 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CD48P09326 AC022031.1-201ENST00000585985 2593 ntBASIC3.85□□□□□ -1.79
CD48P09326 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CD48P09326 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD48P09326 AC134882.1-201ENST00000603738 1676 ntBASIC3.85□□□□□ -1.79
CD48P09326 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CD48P09326 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.85□□□□□ -1.79
CD48P09326 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
CD48P09326 OR52E6-202ENST00000379946 954 ntBASIC3.85□□□□□ -1.79
CD48P09326 SNORD116-1-201ENST00000384335 95 ntBASIC3.85□□□□□ -1.79
CD48P09326 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CD48P09326 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.85□□□□□ -1.79
CD48P09326 RNU2-6P-201ENST00000411404 190 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms