Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 RNU6-8-201ENST00000365467 107 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 AL356057.1-202ENST00000402263 756 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
SNRNP200O75643 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.65□□□□□ -1.99
SNRNP200O75643 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP200O75643 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP200O75643 SNORD109B-201ENST00000458961 67 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 SNORD109A-201ENST00000459128 67 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 RPL23AP14-201ENST00000468281 468 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP200O75643 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.65□□□□□ -1.99
SNRNP200O75643 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.65□□□□□ -1.99
SNRNP200O75643 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 AC012119.1-201ENST00000603184 222 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 AC004832.5-201ENST00000608677 401 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 AC009039.2-201ENST00000624524 529 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SNRNP200O75643 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.65□□□□□ -1.99
SNRNP200O75643 AC118273.1-201ENST00000525324 3006 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 SAGE4P-201ENST00000442271 3381 ntBASIC2.65□□□□□ -1.99
SNRNP200O75643 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SNRNP200O75643 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP200O75643 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SNRNP200O75643 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
SNRNP200O75643 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.64□□□□□ -1.99
SNRNP200O75643 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP200O75643 CASP3P1-201ENST00000446037 609 ntBASIC2.64□□□□□ -1.99
SNRNP200O75643 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP200O75643 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.64□□□□□ -1.99
SNRNP200O75643 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.64□□□□□ -1.99
SNRNP200O75643 AC234778.2-201ENST00000566241 354 ntBASIC2.64□□□□□ -1.99
SNRNP200O75643 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.64□□□□□ -1.99
SNRNP200O75643 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.64□□□□□ -1.99
SNRNP200O75643 AC005046.1-201ENST00000608515 625 ntBASIC2.64□□□□□ -1.99
SNRNP200O75643 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SNRNP200O75643 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
SNRNP200O75643 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
SNRNP200O75643 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP200O75643 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.64□□□□□ -1.99
SNRNP200O75643 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNRNP200O75643 U3.15-201ENST00000365398 212 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AL139281.1-201ENST00000422120 335 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AL354710.1-201ENST00000453641 246 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AP001025.2-201ENST00000490908 477 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP200O75643 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP200O75643 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP200O75643 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP200O75643 AC090115.4-201ENST00000609970 188 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AP004607.9-201ENST00000618202 316 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 CR381653.2-201ENST00000624041 768 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SNRNP200O75643 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP200O75643 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AL589994.1-201ENST00000404962 340 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AC236972.1-201ENST00000433225 199 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP200O75643 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.63□□□□□ -1.99
SNRNP200O75643 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AC007954.1-201ENST00000554198 494 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP200O75643 AC027176.1-201ENST00000560204 514 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP200O75643 OR10AB1P-202ENST00000641219 1686 ntBASIC2.63□□□□□ -1.99
SNRNP200O75643 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
SNRNP200O75643 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP200O75643 SNORA5B-201ENST00000363786 132 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 RNU6-225P-201ENST00000384613 103 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 AIMP1P1-201ENST00000418670 937 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 AC022022.1-201ENST00000430304 178 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.62□□□□□ -1.99
SNRNP200O75643 RN7SKP272-201ENST00000516988 232 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP200O75643 AC068714.1-201ENST00000559623 800 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 MIR3186-201ENST00000577404 85 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.62□□□□□ -1.99
SNRNP200O75643 AL049844.2-201ENST00000604280 628 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 AC114546.3-201ENST00000623582 1734 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.62□□□□□ -1.99
SNRNP200O75643 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP200O75643 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SNRNP200O75643 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP200O75643 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SNRNP200O75643 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP200O75643 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SNRNP200O75643 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.62□□□□□ -1.99
SNRNP200O75643 AC004987.3-201ENST00000413879 771 ntBASIC2.62□□□□□ -1.99
SNRNP200O75643 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms