Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 U6.101-201ENST00000637707 76 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 CRYM-AS1-204ENST00000637983 556 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC099654.12-201ENST00000639868 649 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
VPS4BO75351 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
VPS4BO75351 LINC01355-201ENST00000566551 5444 ntBASIC4.65□□□□□ -1.66
VPS4BO75351 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS4BO75351 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS4BO75351 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS4BO75351 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.66
VPS4BO75351 AC011978.2-201ENST00000569835 2054 ntBASIC4.65□□□□□ -1.66
VPS4BO75351 Z95327.2-201ENST00000414579 1873 ntBASIC4.65□□□□□ -1.66
VPS4BO75351 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.65□□□□□ -1.66
VPS4BO75351 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 RNU1-85P-201ENST00000364127 164 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 RNU6-777P-201ENST00000364265 104 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC009237.10-201ENST00000414112 510 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 TPMTP2-201ENST00000414372 726 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC096632.1-201ENST00000427395 310 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 RPS17P8-201ENST00000434525 335 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 MTATP6P13-201ENST00000438531 667 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS4BO75351 GDI2P2-201ENST00000445131 608 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 TDGF1P1-201ENST00000445734 527 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC093392.2-201ENST00000450682 337 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS4BO75351 OR52A4P-201ENST00000472867 958 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC005726.1-201ENST00000494679 427 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 SLC25A15P5-201ENST00000508033 253 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS4BO75351 RN7SKP92-201ENST00000517266 244 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 PAICSP4-201ENST00000517543 1253 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS4BO75351 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC018552.3-201ENST00000567416 561 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS4BO75351 MIR544B-201ENST00000582372 78 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 MIR4307-201ENST00000582802 84 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC093765.1-201ENST00000603758 881 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC109347.2-201ENST00000610220 349 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 U6atac.1-201ENST00000616025 117 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC104010.1-201ENST00000616889 150 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC068722.2-201ENST00000618734 544 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 CR381572.2-201ENST00000624852 397 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS4BO75351 AC093591.3-201ENST00000634516 308 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 MTND5P28-201ENST00000438005 1594 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 ZFRP1-201ENST00000457579 2970 ntBASIC4.65□□□□□ -1.67
VPS4BO75351 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS4BO75351 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 AP002907.1-201ENST00000606361 1430 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4BO75351 RNA5SP391-201ENST00000363456 119 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 RNU6-259P-201ENST00000383999 107 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 Y_RNA.582-201ENST00000391023 95 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 RPL31P52-201ENST00000407532 367 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AF186996.5-201ENST00000418098 904 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL590609.2-201ENST00000421430 368 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4BO75351 AC104651.1-201ENST00000427559 735 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS4BO75351 MTND5P14-201ENST00000441481 1267 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL022238.1-201ENST00000442557 355 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 RPL34P20-201ENST00000442771 351 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS4BO75351 RPL36AP15-201ENST00000444514 266 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 OR1H1P-201ENST00000448731 937 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 RPL7P31-201ENST00000450192 724 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS4BO75351 TRBV26-201ENST00000456572 344 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 RPL31P50-201ENST00000471002 296 ntBASIC4.64□□□□□ -1.67
VPS4BO75351 AC126182.1-201ENST00000478134 357 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms