Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL161756.2-201ENST00000604597 246 ntBASIC5.95□□□□□ -1.46
GRIN3BO60391 AL591034.3-201ENST00000605511 685 ntBASIC5.95□□□□□ -1.46
GRIN3BO60391 AC009994.1-201ENST00000606889 253 ntBASIC5.95□□□□□ -1.46
GRIN3BO60391 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
GRIN3BO60391 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GRIN3BO60391 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.95□□□□□ -1.46
GRIN3BO60391 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GRIN3BO60391 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GRIN3BO60391 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.95□□□□□ -1.46
GRIN3BO60391 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GRIN3BO60391 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GRIN3BO60391 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.95□□□□□ -1.46
GRIN3BO60391 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
GRIN3BO60391 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.94□□□□□ -1.46
GRIN3BO60391 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
GRIN3BO60391 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.94□□□□□ -1.46
GRIN3BO60391 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 MIR483-201ENST00000385070 76 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
GRIN3BO60391 RPS3AP36-201ENST00000398190 775 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AL022722.2-201ENST00000402519 180 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
GRIN3BO60391 PIGFP2-201ENST00000421400 651 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.94□□□□□ -1.46
GRIN3BO60391 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.94□□□□□ -1.46
GRIN3BO60391 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.94□□□□□ -1.46
GRIN3BO60391 MTND1P11-201ENST00000456661 876 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 RNU7-136P-201ENST00000458819 69 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.94□□□□□ -1.46
GRIN3BO60391 RN7SL197P-201ENST00000466981 299 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 RPS15AP17-201ENST00000470598 390 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 UQCRHP4-201ENST00000471686 272 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.94□□□□□ -1.46
GRIN3BO60391 AC093815.1-201ENST00000508637 280 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.94□□□□□ -1.46
GRIN3BO60391 RNU6-507P-201ENST00000516045 100 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.94□□□□□ -1.46
GRIN3BO60391 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.94□□□□□ -1.46
GRIN3BO60391 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.94□□□□□ -1.46
GRIN3BO60391 AL390334.1-201ENST00000556395 450 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.94□□□□□ -1.46
GRIN3BO60391 AC019322.1-201ENST00000571869 389 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 TPMTP1-201ENST00000592307 737 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 BNIP3P9-201ENST00000603714 553 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AC007363.1-201ENST00000604736 620 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AC078899.5-201ENST00000612475 178 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 Y_RNA.804-201ENST00000615262 101 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
GRIN3BO60391 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
GRIN3BO60391 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.94□□□□□ -1.46
GRIN3BO60391 OR11H5P-202ENST00000641612 1325 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 AC006210.2-201ENST00000367074 1545 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 AC140134.1-201ENST00000511830 3544 ntBASIC5.94□□□□□ -1.46
GRIN3BO60391 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GRIN3BO60391 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.93□□□□□ -1.46
GRIN3BO60391 MTND4P12-201ENST00000498999 1377 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC093671.1-201ENST00000624981 2929 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AL022578.1-201ENST00000439330 1433 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AC097461.1-201ENST00000568928 2821 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 SPRR2C-201ENST00000290702 219 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 Y_RNA.38-201ENST00000362617 102 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 RNU6-534P-201ENST00000364877 106 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
GRIN3BO60391 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 PEX12P1-201ENST00000400284 1048 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 REREP1Y-201ENST00000422655 198 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 PDSS1P1-201ENST00000422953 1114 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.93□□□□□ -1.46
GRIN3BO60391 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
GRIN3BO60391 REREP2Y-201ENST00000439103 200 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.93□□□□□ -1.46
GRIN3BO60391 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AC079804.1-201ENST00000461922 436 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 RPS3AP14-201ENST00000483907 780 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 RN7SL810P-201ENST00000493031 276 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC010493.1-201ENST00000513479 292 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 RNU6-1003P-201ENST00000517099 105 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AL512310.1-201ENST00000548639 172 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 AL358913.1-201ENST00000554342 121 ntBASIC5.93□□□□□ -1.46
GRIN3BO60391 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.93□□□□□ -1.46
GRIN3BO60391 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms