Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.34□□□□□ -1.87
KDELR3O43731 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.34□□□□□ -1.87
KDELR3O43731 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.34□□□□□ -1.87
KDELR3O43731 AC007179.3-201ENST00000604976 235 ntBASIC3.34□□□□□ -1.87
KDELR3O43731 AC015849.2-201ENST00000605738 409 ntBASIC3.34□□□□□ -1.87
KDELR3O43731 AL159169.3-201ENST00000608871 561 ntBASIC3.34□□□□□ -1.87
KDELR3O43731 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
KDELR3O43731 AL157817.1-201ENST00000614264 790 ntBASIC3.34□□□□□ -1.87
KDELR3O43731 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KDELR3O43731 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.34□□□□□ -1.87
KDELR3O43731 MTND5P1-201ENST00000445440 1375 ntBASIC3.34□□□□□ -1.88
KDELR3O43731 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KDELR3O43731 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
KDELR3O43731 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
KDELR3O43731 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KDELR3O43731 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KDELR3O43731 MIR208A-201ENST00000362287 71 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KDELR3O43731 MIR184-201ENST00000384962 84 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 U3.19-201ENST00000390893 196 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 AL121972.1-201ENST00000402023 252 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 MTCO3P31-201ENST00000405526 789 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 AL138880.1-201ENST00000405824 642 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 AC063979.1-201ENST00000415539 377 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 VDAC1P3-201ENST00000434069 851 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 AL591503.2-201ENST00000442314 1005 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 RN7SL807P-201ENST00000470923 297 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.33□□□□□ -1.88
KDELR3O43731 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KDELR3O43731 HMGB1P38-201ENST00000490557 577 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 HMGB3P15-201ENST00000507326 574 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 SYF2P1-201ENST00000550658 413 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.33□□□□□ -1.88
KDELR3O43731 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.33□□□□□ -1.88
KDELR3O43731 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.33□□□□□ -1.88
KDELR3O43731 CCDC58P3-201ENST00000590792 430 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.33□□□□□ -1.88
KDELR3O43731 AC012468.1-201ENST00000604888 430 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 AL009028.1-201ENST00000604895 802 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 PLCE1P1-201ENST00000622094 305 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KDELR3O43731 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
KDELR3O43731 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
KDELR3O43731 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 AL512646.1-201ENST00000269395 1077 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
KDELR3O43731 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 AP002088.1-201ENST00000382740 395 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 RNU6-1181P-201ENST00000384191 106 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AL357075.1-201ENST00000404107 726 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.32□□□□□ -1.88
KDELR3O43731 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.32□□□□□ -1.88
KDELR3O43731 AL355994.1-201ENST00000424379 260 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 HMGB3P11-201ENST00000440127 604 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
KDELR3O43731 SLC31A1P1-201ENST00000451221 567 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AC010401.1-201ENST00000463867 348 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 CYCSP20-201ENST00000473154 315 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.32□□□□□ -1.88
KDELR3O43731 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.32□□□□□ -1.88
KDELR3O43731 AC016065.2-201ENST00000514530 444 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
KDELR3O43731 C1DP5-201ENST00000525775 383 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 AC139103.1-201ENST00000534696 1030 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 TRAV11-201ENST00000539512 339 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 ZNF415P1-201ENST00000582279 1166 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AL606834.2-201ENST00000602954 668 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 MIR7112-201ENST00000616126 65 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
KDELR3O43731 AP001350.1-201ENST00000601906 1524 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.32□□□□□ -1.88
KDELR3O43731 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KDELR3O43731 SAGE4P-201ENST00000442271 3381 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
KDELR3O43731 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KDELR3O43731 AC046144.1-201ENST00000478559 1853 ntBASIC3.31□□□□□ -1.88
KDELR3O43731 MTND5P28-201ENST00000438005 1594 ntBASIC3.31□□□□□ -1.88
KDELR3O43731 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms