Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 GTF2IP23-201ENST00000423746 351 ntBASIC3.01□□□□□ -1.93
SGCEO43556 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.01□□□□□ -1.93
SGCEO43556 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.01□□□□□ -1.93
SGCEO43556 HIGD1AP11-201ENST00000438361 280 ntBASIC3.01□□□□□ -1.93
SGCEO43556 HSPE1P28-201ENST00000443139 211 ntBASIC3.01□□□□□ -1.93
SGCEO43556 RPS27P5-201ENST00000444247 244 ntBASIC3.01□□□□□ -1.93
SGCEO43556 RPS15AP29-201ENST00000445539 400 ntBASIC3.01□□□□□ -1.93
SGCEO43556 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.01□□□□□ -1.93
SGCEO43556 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 AC097262.1-201ENST00000452559 548 ntBASIC3.01□□□□□ -1.93
SGCEO43556 AC007967.1-201ENST00000455422 1159 ntBASIC3.01□□□□□ -1.93
SGCEO43556 RPS4XP2-201ENST00000458402 793 ntBASIC3.01□□□□□ -1.93
SGCEO43556 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
SGCEO43556 AC020898.1-201ENST00000474167 787 ntBASIC3.01□□□□□ -1.93
SGCEO43556 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.01□□□□□ -1.93
SGCEO43556 RNU1-61P-201ENST00000516107 151 ntBASIC3.01□□□□□ -1.93
SGCEO43556 HMGB1P23-201ENST00000518743 568 ntBASIC3.01□□□□□ -1.93
SGCEO43556 HAUS1P3-201ENST00000523909 662 ntBASIC3.01□□□□□ -1.93
SGCEO43556 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.01□□□□□ -1.93
SGCEO43556 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.01□□□□□ -1.93
SGCEO43556 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.01□□□□□ -1.93
SGCEO43556 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.01□□□□□ -1.93
SGCEO43556 AC107954.1-201ENST00000565906 727 ntBASIC3.01□□□□□ -1.93
SGCEO43556 MIR4504-201ENST00000577413 92 ntBASIC3.01□□□□□ -1.93
SGCEO43556 OR4G1P-201ENST00000588632 938 ntBASIC3.01□□□□□ -1.93
SGCEO43556 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SGCEO43556 AC039056.2-201ENST00000622261 511 ntBASIC3.01□□□□□ -1.93
SGCEO43556 AC243312.2-201ENST00000623340 601 ntBASIC3.01□□□□□ -1.93
SGCEO43556 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
SGCEO43556 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
SGCEO43556 API5P2-201ENST00000397055 1498 ntBASIC3.01□□□□□ -1.93
SGCEO43556 ELL2P4-201ENST00000446870 1376 ntBASIC3□□□□□ -1.93
SGCEO43556 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SGCEO43556 RPL7P26-201ENST00000333817 754 ntBASIC3□□□□□ -1.93
SGCEO43556 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 MIR218-2-201ENST00000385006 110 ntBASIC3□□□□□ -1.93
SGCEO43556 RNU6-837P-201ENST00000391056 108 ntBASIC3□□□□□ -1.93
SGCEO43556 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3□□□□□ -1.93
SGCEO43556 SFR1P1-201ENST00000403720 688 ntBASIC3□□□□□ -1.93
SGCEO43556 TANK-206ENST00000406287 875 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
SGCEO43556 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
SGCEO43556 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3□□□□□ -1.93
SGCEO43556 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3□□□□□ -1.93
SGCEO43556 RPL21P23-201ENST00000446654 460 ntBASIC3□□□□□ -1.93
SGCEO43556 AC008264.1-201ENST00000447612 367 ntBASIC3□□□□□ -1.93
SGCEO43556 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3□□□□□ -1.93
SGCEO43556 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3□□□□□ -1.93
SGCEO43556 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3□□□□□ -1.93
SGCEO43556 AC091917.2-201ENST00000505002 744 ntBASIC3□□□□□ -1.93
SGCEO43556 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3□□□□□ -1.93
SGCEO43556 MTND4LP22-201ENST00000508209 276 ntBASIC3□□□□□ -1.93
SGCEO43556 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3□□□□□ -1.93
SGCEO43556 AC026403.1-201ENST00000518938 295 ntBASIC3□□□□□ -1.93
SGCEO43556 AF279873.1-201ENST00000523393 313 ntBASIC3□□□□□ -1.93
SGCEO43556 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 NOP56P3-201ENST00000549457 385 ntBASIC3□□□□□ -1.93
SGCEO43556 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3□□□□□ -1.93
SGCEO43556 AC009032.1-201ENST00000617574 431 ntBASIC3□□□□□ -1.93
SGCEO43556 AL357559.1-201ENST00000622228 274 ntBASIC3□□□□□ -1.93
SGCEO43556 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
SGCEO43556 AL645937.1-201ENST00000641739 1652 ntBASIC3□□□□□ -1.93
SGCEO43556 AC046144.1-201ENST00000478559 1853 ntBASIC3□□□□□ -1.93
SGCEO43556 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3□□□□□ -1.93
SGCEO43556 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
SGCEO43556 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3□□□□□ -1.93
SGCEO43556 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SGCEO43556 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SGCEO43556 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SGCEO43556 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SGCEO43556 RNU6-50P-201ENST00000362356 103 ntBASIC2.99□□□□□ -1.93
SGCEO43556 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SGCEO43556 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SGCEO43556 DSTNP4-201ENST00000399472 474 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC073264.1-201ENST00000411508 416 ntBASIC2.99□□□□□ -1.93
SGCEO43556 Z99755.1-201ENST00000414048 380 ntBASIC2.99□□□□□ -1.93
SGCEO43556 RPS29P4-201ENST00000414733 161 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 GLRXP1-201ENST00000423261 334 ntBASIC2.99□□□□□ -1.93
SGCEO43556 RPL23AP82-202ENST00000427528 469 ntBASIC2.99□□□□□ -1.93
SGCEO43556 ATP5JP1-201ENST00000431631 322 ntBASIC2.99□□□□□ -1.93
SGCEO43556 B3GNT2P1-201ENST00000434960 952 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC092641.1-201ENST00000440229 772 ntBASIC2.99□□□□□ -1.93
SGCEO43556 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.99□□□□□ -1.93
SGCEO43556 RPS26P56-201ENST00000444468 240 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.99□□□□□ -1.93
SGCEO43556 NPM1P13-201ENST00000452663 865 ntBASIC2.99□□□□□ -1.93
SGCEO43556 MRPL35P4-201ENST00000453682 566 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AL035407.2-201ENST00000454090 378 ntBASIC2.99□□□□□ -1.93
SGCEO43556 NECAP1P2-201ENST00000455668 727 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.99□□□□□ -1.93
SGCEO43556 snoU13.24-201ENST00000458998 104 ntBASIC2.99□□□□□ -1.93
SGCEO43556 CENPBD1P1-201ENST00000464061 469 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC025518.1-201ENST00000479856 347 ntBASIC2.99□□□□□ -1.93
SGCEO43556 AC073522.1-201ENST00000483312 377 ntBASIC2.99□□□□□ -1.93
SGCEO43556 KCTD9P5-201ENST00000504141 1170 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms