Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC004908.2-201ENST00000609090 574 ntBASIC5.8□□□□□ -1.48
SOX1O00570 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.8□□□□□ -1.48
SOX1O00570 MTND4LP32-201ENST00000636111 270 ntBASIC5.8□□□□□ -1.48
SOX1O00570 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 AP000866.6-201ENST00000638898 3579 ntBASIC5.8□□□□□ -1.48
SOX1O00570 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.8□□□□□ -1.48
SOX1O00570 AC011369.2-201ENST00000624423 1567 ntBASIC5.8□□□□□ -1.48
SOX1O00570 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SOX1O00570 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SOX1O00570 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.8□□□□□ -1.48
SOX1O00570 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SOX1O00570 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SOX1O00570 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.79□□□□□ -1.48
SOX1O00570 AC034229.2-201ENST00000566945 2508 ntBASIC5.79□□□□□ -1.48
SOX1O00570 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX1O00570 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 RNU4-48P-201ENST00000365559 182 ntBASIC5.79□□□□□ -1.48
SOX1O00570 Y_RNA.395-201ENST00000383945 109 ntBASIC5.79□□□□□ -1.48
SOX1O00570 RNU6-196P-201ENST00000384315 107 ntBASIC5.79□□□□□ -1.48
SOX1O00570 SNORD116-29-201ENST00000384516 83 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC016769.3-201ENST00000396562 315 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AL356421.1-201ENST00000403255 413 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC048351.1-201ENST00000420064 602 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.79□□□□□ -1.48
SOX1O00570 AL358176.2-201ENST00000425769 204 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 PPIAP13-201ENST00000434706 478 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.79□□□□□ -1.48
SOX1O00570 HMGB3P15-201ENST00000507326 574 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 RNU4-29P-201ENST00000515943 174 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 AP000907.2-201ENST00000530827 353 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AP000889.1-201ENST00000530968 660 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC018630.1-201ENST00000541376 925 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.79□□□□□ -1.48
SOX1O00570 DNAJC8P1-201ENST00000554535 372 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC106785.1-201ENST00000565935 262 ntBASIC5.79□□□□□ -1.48
SOX1O00570 MIR4301-201ENST00000577203 66 ntBASIC5.79□□□□□ -1.48
SOX1O00570 MIR3146-201ENST00000580367 79 ntBASIC5.79□□□□□ -1.48
SOX1O00570 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.79□□□□□ -1.48
SOX1O00570 CYP2C61P-201ENST00000604072 290 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.79□□□□□ -1.48
SOX1O00570 uc_338.15-201ENST00000615470 191 ntBASIC5.79□□□□□ -1.48
SOX1O00570 TCL6_3.1-201ENST00000619064 137 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AC015908.5-201ENST00000623289 343 ntBASIC5.79□□□□□ -1.48
SOX1O00570 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.79□□□□□ -1.48
SOX1O00570 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.79□□□□□ -1.48
SOX1O00570 AC092070.2-203ENST00000598377 3644 ntBASIC5.79□□□□□ -1.48
SOX1O00570 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SOX1O00570 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SOX1O00570 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SOX1O00570 DNM1P47-203ENST00000571780 12667 ntBASIC5.78□□□□□ -1.48
SOX1O00570 MTND5P33-201ENST00000571250 1450 ntBASIC5.78□□□□□ -1.48
SOX1O00570 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX1O00570 SNORA22B-201ENST00000383876 138 ntBASIC5.78□□□□□ -1.48
SOX1O00570 MIR514A2-201ENST00000385131 88 ntBASIC5.78□□□□□ -1.48
SOX1O00570 MIR514A3-201ENST00000385132 88 ntBASIC5.78□□□□□ -1.48
SOX1O00570 MIR137-201ENST00000385223 102 ntBASIC5.78□□□□□ -1.48
SOX1O00570 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 AL583835.1-201ENST00000399570 407 ntBASIC5.78□□□□□ -1.48
SOX1O00570 AL023807.1-201ENST00000407932 359 ntBASIC5.78□□□□□ -1.48
SOX1O00570 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX1O00570 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX1O00570 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX1O00570 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 AC006967.1-201ENST00000467608 589 ntBASIC5.78□□□□□ -1.48
SOX1O00570 HSPD1P15-201ENST00000505573 1122 ntBASIC5.78□□□□□ -1.48
SOX1O00570 AC022034.1-201ENST00000512867 2156 ntBASIC5.78□□□□□ -1.48
SOX1O00570 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.78□□□□□ -1.48
SOX1O00570 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.78□□□□□ -1.48
SOX1O00570 AP003497.1-201ENST00000528472 562 ntBASIC5.78□□□□□ -1.48
SOX1O00570 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX1O00570 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX1O00570 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX1O00570 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX1O00570 HSPE1P14-201ENST00000605812 302 ntBASIC5.78□□□□□ -1.48
SOX1O00570 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.78□□□□□ -1.48
SOX1O00570 AC079597.1-201ENST00000624306 508 ntBASIC5.78□□□□□ -1.48
SOX1O00570 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX1O00570 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SOX1O00570 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms