Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.53□□□□□ -2
SDCBPO00560 VN1R48P-201ENST00000448149 1036 ntBASIC2.53□□□□□ -2
SDCBPO00560 TPMTP4-201ENST00000450749 678 ntBASIC2.53□□□□□ -2
SDCBPO00560 SLC31A1P1-201ENST00000451221 567 ntBASIC2.53□□□□□ -2
SDCBPO00560 AC091179.1-201ENST00000461606 579 ntBASIC2.53□□□□□ -2
SDCBPO00560 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.53□□□□□ -2
SDCBPO00560 RPL21P129-201ENST00000491732 478 ntBASIC2.53□□□□□ -2
SDCBPO00560 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.53□□□□□ -2
SDCBPO00560 AC090071.1-201ENST00000507713 644 ntBASIC2.53□□□□□ -2
SDCBPO00560 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.53□□□□□ -2
SDCBPO00560 AC021146.7-201ENST00000509604 775 ntBASIC2.53□□□□□ -2
SDCBPO00560 AC110792.2-201ENST00000510278 224 ntBASIC2.53□□□□□ -2
SDCBPO00560 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.53□□□□□ -2
SDCBPO00560 AC005921.1-201ENST00000510589 286 ntBASIC2.53□□□□□ -2
SDCBPO00560 AC074250.1-201ENST00000511117 192 ntBASIC2.53□□□□□ -2
SDCBPO00560 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SDCBPO00560 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.53□□□□□ -2
SDCBPO00560 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.53□□□□□ -2
SDCBPO00560 CCNG2P1-201ENST00000549521 1000 ntBASIC2.53□□□□□ -2
SDCBPO00560 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.53□□□□□ -2
SDCBPO00560 UBL5P2-201ENST00000583788 219 ntBASIC2.53□□□□□ -2
SDCBPO00560 AC005242.1-201ENST00000585658 438 ntBASIC2.53□□□□□ -2
SDCBPO00560 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.53□□□□□ -2
SDCBPO00560 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.53□□□□□ -2
SDCBPO00560 AL020991.1-201ENST00000612314 373 ntBASIC2.53□□□□□ -2
SDCBPO00560 MIR622-201ENST00000638396 96 ntBASIC2.53□□□□□ -2
SDCBPO00560 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SDCBPO00560 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
SDCBPO00560 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.53□□□□□ -2
SDCBPO00560 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.53□□□□□ -2.01
SDCBPO00560 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SDCBPO00560 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.52□□□□□ -2.01
SDCBPO00560 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SDCBPO00560 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDCBPO00560 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SDCBPO00560 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.52□□□□□ -2.01
SDCBPO00560 SNORA71.3-201ENST00000362582 128 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDCBPO00560 SNORA48.7-201ENST00000391302 135 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 RNA5SP120-201ENST00000410900 112 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.52□□□□□ -2.01
SDCBPO00560 AL392003.1-201ENST00000434394 243 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.52□□□□□ -2.01
SDCBPO00560 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.52□□□□□ -2.01
SDCBPO00560 AC044797.1-201ENST00000445744 679 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.52□□□□□ -2.01
SDCBPO00560 OR7L1P-201ENST00000456181 380 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.52□□□□□ -2.01
SDCBPO00560 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.52□□□□□ -2.01
SDCBPO00560 RPS17P11-201ENST00000474297 293 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AP000926.3-201ENST00000497201 299 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC078918.1-201ENST00000498515 228 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 HSPD1P15-201ENST00000505573 1122 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 PTGES3P3-201ENST00000511479 482 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 RN7SKP234-201ENST00000517173 224 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.52□□□□□ -2.01
SDCBPO00560 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.52□□□□□ -2.01
SDCBPO00560 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.52□□□□□ -2.01
SDCBPO00560 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.52□□□□□ -2.01
SDCBPO00560 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.52□□□□□ -2.01
SDCBPO00560 MIR1254-2-201ENST00000579553 63 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.52□□□□□ -2.01
SDCBPO00560 AC010928.3-201ENST00000587712 541 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.52□□□□□ -2.01
SDCBPO00560 AC090525.3-201ENST00000605601 189 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC105227.2-201ENST00000615075 605 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 MIR7112-201ENST00000616126 65 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AL590410.1-201ENST00000617925 333 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 MIR6075-201ENST00000620782 95 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC073348.1-201ENST00000623002 331 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 AC007342.8-201ENST00000623278 678 ntBASIC2.52□□□□□ -2.01
SDCBPO00560 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.52□□□□□ -2.01
SDCBPO00560 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.52□□□□□ -2.01
SDCBPO00560 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDCBPO00560 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SDCBPO00560 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 RPL9P7-201ENST00000330965 580 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDCBPO00560 SNORA31-201ENST00000362607 130 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 RNU6-618P-201ENST00000363518 112 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 RNU6-670P-201ENST00000364312 104 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDCBPO00560 RNVU1-14-201ENST00000384770 164 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 AP000567.1-201ENST00000406413 156 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 RN7SKP27-201ENST00000410684 333 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 RNA5SP498-201ENST00000411342 120 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 AL451074.5-201ENST00000415894 435 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 MTND2P16-201ENST00000419987 799 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDCBPO00560 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 RPL6P5-201ENST00000445678 828 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.51□□□□□ -2.01
SDCBPO00560 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.51□□□□□ -2.01
SDCBPO00560 RNU4-60P-201ENST00000517239 135 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms