Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MTND4P9-201ENST00000507819 1346 ntBASIC3.58□□□□□ -1.84
PDLIM1O00151 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM1O00151 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM1O00151 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM1O00151 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM1O00151 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PDLIM1O00151 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 SPRR2C-201ENST00000290702 219 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM1O00151 MTCO2P31-201ENST00000402702 684 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM1O00151 BTF3P8-201ENST00000414577 526 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM1O00151 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 OR51AB1P-201ENST00000429046 620 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 RPL23AP33-201ENST00000442301 452 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 RPL21P133-201ENST00000443666 476 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 BX276092.4-201ENST00000452056 248 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM1O00151 RN7SL283P-201ENST00000489055 303 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM1O00151 AC011352.3-201ENST00000505162 593 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM1O00151 MTND4LP22-201ENST00000508209 276 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC117529.2-201ENST00000512159 2068 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 RNA5SP385-201ENST00000515947 110 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 snoZ278.1-201ENST00000517059 112 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 MTCO1P49-201ENST00000523429 802 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AC111188.2-201ENST00000529697 1387 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM1O00151 MIR4506-201ENST00000584693 77 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC090330.1-201ENST00000588646 764 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM1O00151 AF129408.1-201ENST00000608767 431 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 AC068620.4-201ENST00000636730 1182 ntBASIC3.57□□□□□ -1.84
PDLIM1O00151 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM1O00151 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM1O00151 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PDLIM1O00151 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 AL355578.1-201ENST00000607405 1328 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 RNU6-298P-201ENST00000390888 96 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 BTBD10P2-201ENST00000404779 676 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 HSPE1P26-201ENST00000405341 275 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 RPL21P65-201ENST00000406094 466 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 SDCBPP3-201ENST00000419629 891 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 OR4F13P-201ENST00000428478 931 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AL117339.2-201ENST00000430475 180 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 SDR42E1P3-201ENST00000438345 502 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 RPL7P59-201ENST00000447700 943 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AC244505.3-201ENST00000454598 187 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM1O00151 RPS15AP1-201ENST00000457423 391 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC006483.1-201ENST00000487308 313 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC008837.1-201ENST00000511513 412 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AC109471.1-201ENST00000511631 612 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 FTH1P21-201ENST00000512179 511 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC087369.1-201ENST00000520775 996 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AP001207.1-201ENST00000524051 481 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM1O00151 OR8R1P-201ENST00000543943 764 ntBASIC3.56□□□□□ -1.84
PDLIM1O00151 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM1O00151 AC005951.1-201ENST00000576706 485 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms