Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 COTL1P1-201ENST00000422309 375 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MTCO1P52-201ENST00000433928 531 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 SETP5-201ENST00000437270 562 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RPS12P18-201ENST00000442381 270 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC140076.1-201ENST00000449897 361 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 HMGB1P5-202ENST00000451497 985 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RPL21P18-201ENST00000469899 480 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RPL7P5-201ENST00000471472 736 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 OR5H4P-201ENST00000510851 923 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RNU6-319P-201ENST00000516025 108 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AL391834.1-201ENST00000609609 560 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC139769.3-201ENST00000618383 175 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC116563.2-201ENST00000624751 535 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC019080.5-201ENST00000624891 757 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AL672296.1-201ENST00000427780 2158 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.48□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MTND5P7-201ENST00000413558 1798 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MTND5P19-201ENST00000424872 1794 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RNU1-140P-201ENST00000365040 165 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 SNORD15B-201ENST00000384714 146 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RN7SKP58-201ENST00000411010 305 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MTND4P11-201ENST00000417020 1058 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 TRGV6-201ENST00000417928 299 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC093151.1-201ENST00000427711 313 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MTCYBP29-201ENST00000436327 1006 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AL831737.1-201ENST00000441288 271 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 GAPDHP27-201ENST00000447427 1020 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 NANOGNBP1-201ENST00000448444 480 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 ELOCP23-201ENST00000452014 332 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 S100A11P2-201ENST00000467589 312 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC098799.1-201ENST00000504752 800 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC118282.1-201ENST00000506408 765 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC119751.1-201ENST00000513357 765 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 RN7SKP43-201ENST00000516173 320 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 OR4T1P-201ENST00000554933 911 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 OR4U1P-201ENST00000554958 912 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 H3F3AP1-201ENST00000559984 334 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC006270.2-201ENST00000578523 652 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MAGOH2P-202ENST00000584384 429 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AC124312.4-201ENST00000605533 310 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 AF117829.1-206ENST00000621883 3802 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 MIR4278-201ENST00000636094 69 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 ZNF807-201ENST00000328088 1707 ntBASIC2.47□□□□□ -2.01
TCRBV4S1A1TA0A5B7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.46□□□□□ -2.01
TCRBV4S1A1TA0A5B7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNU6-7-201ENST00000364784 107 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNU6-8-201ENST00000365467 107 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 MIR591-201ENST00000385290 95 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RNA5SP274-201ENST00000410484 108 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 BMS1P22-201ENST00000414726 313 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC011242.1-201ENST00000433596 1158 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 PTGES3P5-201ENST00000455109 434 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC091179.1-201ENST00000461606 579 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 RPS3AP14-201ENST00000483907 780 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 HIGD1AP3-201ENST00000515857 278 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC009812.2-201ENST00000517657 457 ntBASIC2.46□□□□□ -2.02
TCRBV4S1A1TA0A5B7 AC022790.1-201ENST00000522872 204 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms