Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.12□□□□□ -1.43
USP35Q9P2H5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.12□□□□□ -1.43
USP35Q9P2H5 AC024220.1-201ENST00000603675 484 ntBASIC6.12□□□□□ -1.43
USP35Q9P2H5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.12□□□□□ -1.43
USP35Q9P2H5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
USP35Q9P2H5 AL136164.3-201ENST00000624429 3978 ntBASIC6.12□□□□□ -1.43
USP35Q9P2H5 AC107068.1-201ENST00000563286 4218 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 AC097714.1-201ENST00000511272 1647 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 RNA5SP387-201ENST00000364226 106 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 RNU1-132P-201ENST00000364300 164 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 U3.15-201ENST00000365398 212 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 RNU6-761P-201ENST00000384148 107 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 RPL17P50-201ENST00000396131 546 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 TPMTP2-201ENST00000414372 726 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 SNRPFP1-201ENST00000414761 252 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 HSFY6P-201ENST00000445573 403 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 AL358232.1-201ENST00000448030 501 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 RNU7-136P-201ENST00000458819 69 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 SCARNA10-201ENST00000459255 330 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 RPL5P30-201ENST00000465511 891 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 HSPE1P23-201ENST00000509838 286 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP35Q9P2H5 OR7K1P-201ENST00000546439 926 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 MIR4444-1-201ENST00000581696 74 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 MIR4444-2-201ENST00000584390 74 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 AL158196.1-201ENST00000616786 434 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 AC005086.4-201ENST00000623065 213 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 MIR492-201ENST00000638676 116 ntBASIC6.11□□□□□ -1.43
USP35Q9P2H5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.11□□□□□ -1.43
USP35Q9P2H5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP35Q9P2H5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP35Q9P2H5 KPNA2P2-201ENST00000419546 1489 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 Y_RNA.18-201ENST00000362461 102 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 RNU1-20P-201ENST00000363314 162 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 Y_RNA.169-201ENST00000363745 96 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 SNORA11F-201ENST00000408237 128 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 RPS15AP38-201ENST00000413110 372 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 PDSS1P1-201ENST00000422953 1114 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 EIF4HP2-201ENST00000424380 563 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 SNRPEP7-201ENST00000438350 220 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 RPS20P24-201ENST00000457473 361 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 RN7SL517P-201ENST00000462240 305 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC090142.1-201ENST00000465776 462 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC087312.1-201ENST00000471411 480 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC108145.1-201ENST00000503770 153 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC108475.1-201ENST00000507880 950 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC024560.3-201ENST00000608482 349 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC004223.4-201ENST00000612426 332 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AL357080.1-201ENST00000617394 239 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC055839.1-201ENST00000634467 498 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC139713.2-215ENST00000641428 5037 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 AC087359.1-201ENST00000508335 1740 ntBASIC6.1□□□□□ -1.43
USP35Q9P2H5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.1□□□□□ -1.43
USP35Q9P2H5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP35Q9P2H5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP35Q9P2H5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP35Q9P2H5 AC011477.1-204ENST00000623416 1325 ntBASIC6.09□□□□□ -1.43
USP35Q9P2H5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC6.09□□□□□ -1.43
USP35Q9P2H5 MIR383-201ENST00000362257 73 ntBASIC6.09□□□□□ -1.43
USP35Q9P2H5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP35Q9P2H5 DHFRP6-201ENST00000401776 268 ntBASIC6.09□□□□□ -1.43
USP35Q9P2H5 AL121972.1-201ENST00000402023 252 ntBASIC6.09□□□□□ -1.43
USP35Q9P2H5 GLRXP1-201ENST00000423261 334 ntBASIC6.09□□□□□ -1.43
USP35Q9P2H5 AC006548.1-201ENST00000427470 102 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms