Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC106785.1-201ENST00000565935 262 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 MIR5186-201ENST00000577504 120 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 MTCYBP22-201ENST00000603788 447 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 MIR7844-201ENST00000616161 122 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 MIR7151-201ENST00000617477 60 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC018816.2-201ENST00000621460 353 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC140113.4-201ENST00000622087 222 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC006927.3-201ENST00000638789 384 ntBASIC4.81□□□□□ -1.64
COL20A1Q9P218 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL20A1Q9P218 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
COL20A1Q9P218 OR4G11P-202ENST00000642116 1414 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 Y_RNA.318-201ENST00000365131 97 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 MIR195-201ENST00000385194 87 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 RNU11-4P-201ENST00000391149 133 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 EIF1P3-201ENST00000423841 334 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AL117339.2-201ENST00000430475 180 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 KCTD10P1-201ENST00000434203 625 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC122718.1-201ENST00000439448 744 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 MTCO2P7-201ENST00000446518 666 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 RNA5SP246-201ENST00000458909 119 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 FAM133DP-201ENST00000464802 691 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 RPS15AP17-201ENST00000470598 390 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 SETP11-201ENST00000473027 690 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 RAP1BP2-201ENST00000478270 544 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC108022.1-201ENST00000493466 478 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC080014.1-201ENST00000496877 1201 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 OR2A20P-203ENST00000498397 1268 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 RNF138P1-201ENST00000502765 546 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC090071.1-201ENST00000507713 644 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 MTCYBP37-201ENST00000510642 1133 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 MTCYBP43-201ENST00000513621 740 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 SNORD116-26-201ENST00000516006 96 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 MIR2116-201ENST00000517221 80 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC023161.2-201ENST00000551218 780 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC024909.2-201ENST00000553035 286 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 FAM157B-203ENST00000639350 358 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 SAGE4P-201ENST00000442271 3381 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.8□□□□□ -1.64
COL20A1Q9P218 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 RLIMP1-201ENST00000339626 1680 ntBASIC4.8□□□□□ -1.64
COL20A1Q9P218 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 SNORA51.6-201ENST00000384151 125 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 RPL32P23-201ENST00000397237 405 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 VDAC2P1-201ENST00000399358 958 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 RNU2-21P-201ENST00000410368 188 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 ABCF2P2-201ENST00000450549 296 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 OR6C5P-201ENST00000452388 923 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 RPL5P32-201ENST00000454085 879 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 FAM172BP-201ENST00000487497 1089 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.79□□□□□ -1.64
COL20A1Q9P218 AL132838.2-201ENST00000492041 314 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 HMGB1P21-201ENST00000502313 581 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC091435.1-201ENST00000505442 584 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 AC006499.2-201ENST00000513470 337 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 RN7SKP46-201ENST00000515942 234 ntBASIC4.79□□□□□ -1.64
COL20A1Q9P218 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL20A1Q9P218 NDUFA5P2-201ENST00000519723 344 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms