Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CFTRP1-201ENST00000456646 183 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 RPL37P3-201ENST00000456825 293 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC092451.1-201ENST00000480211 153 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 ACTG1P13-201ENST00000486987 1043 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 SNX5P1-201ENST00000505757 1041 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 RNA5SP164-201ENST00000516533 110 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 IGKV2-23-201ENST00000518729 323 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC004217.3-201ENST00000551552 878 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 MIR3186-201ENST00000577404 85 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 MIR5047-201ENST00000579212 100 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 MIR4697-201ENST00000582977 78 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC007687.1-201ENST00000602704 304 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC025811.1-201ENST00000604312 472 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL354760.1-201ENST00000608357 643 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AP004247.3-201ENST00000608682 624 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AL161616.1-201ENST00000611867 286 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC107075.1-201ENST00000613695 314 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 MIR6810-201ENST00000622701 70 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AP000346.3-201ENST00000622821 210 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AP002782.1-201ENST00000623107 614 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC017037.3-201ENST00000625016 472 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 CU459211.1-201ENST00000635667 749 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.83
NDE1Q9NXR1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NDE1Q9NXR1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL161909.1-201ENST00000397390 712 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 FABP12P1-201ENST00000401911 322 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 RNU6-272P-201ENST00000411028 104 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 TPT1P2-201ENST00000413105 503 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 TRGV6-201ENST00000417928 299 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 GTF2IP23-201ENST00000423746 351 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL360081.1-201ENST00000428299 555 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL138799.3-201ENST00000438968 350 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 RPL7P59-201ENST00000447700 943 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC011979.1-201ENST00000472300 483 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 UBE2CP3-201ENST00000502715 450 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC008837.2-201ENST00000513076 418 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AF279873.1-201ENST00000523393 313 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 MTATP6P15-201ENST00000527233 835 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC011602.1-201ENST00000546484 331 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 ZNF321P-202ENST00000550843 495 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC063949.1-201ENST00000552900 865 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 DUXAP6-201ENST00000553858 601 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 TGIF1P1-201ENST00000558095 802 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 MIR3912-201ENST00000577566 105 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC006270.2-201ENST00000578523 652 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC021749.1-201ENST00000604322 607 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL163642.2-201ENST00000604722 1019 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC099669.2-201ENST00000616549 437 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AL157770.1-201ENST00000623049 439 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC010608.2-201ENST00000624830 470 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 AC012618.3-205ENST00000637896 1496 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms