Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 TGIF1P1-201ENST00000558095 802 ntBASIC4.04□□□□□ -1.76
SALL1Q9NSC2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 AC026741.1-201ENST00000605892 482 ntBASIC4.04□□□□□ -1.76
SALL1Q9NSC2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 AL590396.2-201ENST00000636511 1041 ntBASIC4.04□□□□□ -1.76
SALL1Q9NSC2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SALL1Q9NSC2 MTND4P9-201ENST00000507819 1346 ntBASIC4.04□□□□□ -1.76
SALL1Q9NSC2 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RNU6-185P-201ENST00000384421 107 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RNU4-47P-201ENST00000410876 114 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RNU6-55P-201ENST00000411092 107 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RNU6-954P-201ENST00000411355 107 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 MTCO1P52-201ENST00000433928 531 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 HMGN1P5-201ENST00000448591 263 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RPL21P47-201ENST00000483696 477 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RN7SL504P-201ENST00000494496 287 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 APOOP4-201ENST00000513530 597 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 MTCO3P27-201ENST00000514397 196 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RNU5A-7P-201ENST00000515979 116 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC090136.1-201ENST00000520009 240 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AP001636.2-201ENST00000525517 696 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC011602.1-201ENST00000546484 331 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC009101.1-201ENST00000568135 242 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 BNIP3P39-201ENST00000601077 554 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC079610.2-201ENST00000604818 690 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC021851.1-201ENST00000608537 1082 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AP005229.2-201ENST00000609980 697 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AL356321.1-201ENST00000621360 228 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.03□□□□□ -1.76
SALL1Q9NSC2 OR11H5P-202ENST00000641612 1325 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 AL513302.2-201ENST00000562313 1842 ntBASIC4.03□□□□□ -1.76
SALL1Q9NSC2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
SALL1Q9NSC2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC069282.1-201ENST00000411911 526 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC105402.1-201ENST00000413336 545 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 MTCO1P43-201ENST00000431831 488 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 HMGB1P26-201ENST00000452520 628 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC097262.1-201ENST00000452559 548 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 RPL6P9-201ENST00000466502 859 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 TRBV8-2-201ENST00000475637 270 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 NDUFB9P3-201ENST00000521269 501 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC018618.2-201ENST00000604770 446 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC011374.2-201ENST00000607135 526 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC083865.1-201ENST00000636634 831 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 AC134882.1-201ENST00000603738 1676 ntBASIC4.02□□□□□ -1.77
SALL1Q9NSC2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SALL1Q9NSC2 PNPT1P2-201ENST00000456768 2050 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 SNORD56.4-201ENST00000363883 71 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 RNU6-1005P-201ENST00000384519 107 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 HMGB1P13-201ENST00000406019 642 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 RNA5SP31-201ENST00000411144 127 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 UBE2V1P11-201ENST00000411559 285 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AC023128.2-201ENST00000420880 1223 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AL353705.1-201ENST00000433468 480 ntBASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL1Q9NSC2 AC006994.1-201ENST00000438212 839 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms