Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 HMGB3P23-201ENST00000414981 585 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC008280.1-201ENST00000418851 412 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 MTND2P3-201ENST00000452458 470 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC012181.1-201ENST00000479895 423 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 HMGN1P11-201ENST00000508668 303 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC093853.1-201ENST00000515689 483 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AP001207.1-201ENST00000524051 481 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC026333.2-201ENST00000542164 106 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC012254.4-201ENST00000588843 273 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL451086.1-201ENST00000605596 223 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL450270.1-201ENST00000606160 391 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 SNORA51-201ENST00000606420 132 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC021851.1-201ENST00000608537 1082 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC073569.3-201ENST00000619055 682 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL357559.1-201ENST00000622228 274 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC118273.1-201ENST00000525324 3006 ntBASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCNB1IP1Q9NPC3 AC092326.2-201ENST00000624772 1561 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 U3.11-201ENST00000364476 212 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL121972.1-201ENST00000402023 252 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 RPS24P6-201ENST00000452670 400 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 BX248409.1-201ENST00000455497 255 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 RPS15AP1-201ENST00000457423 391 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC108729.2-201ENST00000476543 840 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC091959.2-201ENST00000477363 321 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 SETP14-201ENST00000497538 873 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC104108.1-201ENST00000509930 412 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC104057.1-201ENST00000515547 497 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 SCARNA14-201ENST00000516903 136 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC107934.2-201ENST00000518653 310 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC104027.1-201ENST00000521887 300 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC109635.4-202ENST00000531666 412 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC084824.1-201ENST00000550917 1005 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC023161.2-201ENST00000551218 780 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL163153.1-201ENST00000554223 283 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 MIR4474-201ENST00000579189 78 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 VN1R88P-201ENST00000596787 292 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC040174.2-201ENST00000602701 465 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AC006077.1-201ENST00000604746 343 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL391497.1-201ENST00000608671 547 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL163051.2-201ENST00000618976 735 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 SNORA50A-202ENST00000629536 136 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL590396.2-201ENST00000636511 1041 ntBASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
CCNB1IP1Q9NPC3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 RNU6-374P-201ENST00000364146 108 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 RNA5SP479-201ENST00000364858 117 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 FABP12P1-201ENST00000401911 322 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 PAICSP7-201ENST00000419829 962 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 RPL21P66-201ENST00000426566 466 ntBASIC3.24□□□□□ -1.89
CCNB1IP1Q9NPC3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms