Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPL12P22-201ENST00000519073 490 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC026616.1-201ENST00000523157 525 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 MIR5195-201ENST00000583555 115 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AL160281.1-201ENST00000605307 311 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 BRDTP1-201ENST00000605735 677 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC006963.1-201ENST00000624003 1052 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC021755.1-201ENST00000559747 1447 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AL359893.1-201ENST00000447628 1580 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 CR381670.1-201ENST00000624291 1693 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 MTND5P11-201ENST00000511037 1812 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 RNA5SP50-201ENST00000363731 107 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 MIR490-201ENST00000384865 128 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 HSPE1P8-201ENST00000406997 288 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC073310.1-201ENST00000423226 1033 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 PNRC2P1-201ENST00000423940 420 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC093422.3-201ENST00000428506 305 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 CYCSP4-201ENST00000429682 331 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 ETF1P3-201ENST00000430422 1160 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 FABP5P3-201ENST00000437960 408 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AL513321.1-201ENST00000441175 761 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC098824.1-201ENST00000453565 980 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC084198.1-201ENST00000477747 402 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC015724.1-201ENST00000478577 156 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 OR52A4P-202ENST00000481634 799 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AP003385.6-201ENST00000531603 374 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC007458.1-201ENST00000542812 373 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 CKS1BP1-201ENST00000555221 240 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC090877.1-201ENST00000561418 344 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC037471.2-201ENST00000564941 598 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC099489.2-201ENST00000574976 260 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AL031985.2-201ENST00000600955 480 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC113368.1-201ENST00000603736 382 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC135178.6-201ENST00000605314 398 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC100814.1-201ENST00000606963 623 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 MIR1264-201ENST00000616374 69 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC091905.1-201ENST00000624400 311 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AL049781.1-201ENST00000623195 3585 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AC007823.1-201ENST00000569932 1566 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 AL355578.1-201ENST00000607405 1328 ntBASIC3.66□□□□□ -1.82
TM9SF3Q9HD45 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 AL136164.4-201ENST00000625013 2135 ntBASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.65□□□□□ -1.82
TM9SF3Q9HD45 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 RNU6-374P-201ENST00000364146 108 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 RNA5SP424-201ENST00000390988 115 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 AL353692.2-201ENST00000407054 335 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 RPS3AP9-201ENST00000417027 792 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 TOMM22P1-201ENST00000418578 312 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 ARL2BPP3-201ENST00000421226 480 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 HSFY1P1-201ENST00000423928 1178 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 CR848007.2-201ENST00000424918 787 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 AC097713.2-201ENST00000430199 356 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 PTP4A1P3-201ENST00000433661 420 ntBASIC3.65□□□□□ -1.83
TM9SF3Q9HD45 SKP1P1-201ENST00000438081 489 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms