Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 ATP5J2P3-201ENST00000451550 258 ntBASIC2.69□□□□□ -1.98
CHD8Q9HCK8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 snoU13.31-201ENST00000607291 104 ntBASIC2.69□□□□□ -1.98
CHD8Q9HCK8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 AP003122.5-201ENST00000527668 3766 ntBASIC2.69□□□□□ -1.98
CHD8Q9HCK8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CHD8Q9HCK8 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 RNA5SP52-201ENST00000362448 134 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 U3.23-201ENST00000391132 200 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 RPS26P30-201ENST00000443431 335 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC108860.1-201ENST00000484521 383 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 RNU1-143P-201ENST00000516296 146 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 U1.23-201ENST00000610293 146 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 RNU1-68P-201ENST00000615382 146 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AL158062.1-201ENST00000619632 745 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 U1.39-201ENST00000621562 146 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 LINC00216-201ENST00000623548 1126 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC025048.6-202ENST00000627667 438 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC008725.1-201ENST00000605123 2263 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 MIR513A2-201ENST00000385249 127 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 SNORA17.3-201ENST00000391159 129 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 ERHP2-201ENST00000402323 299 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 RNU6-321P-201ENST00000410912 106 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC117522.2-201ENST00000510049 657 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 RPS4XP5-202ENST00000449995 1334 ntBASIC2.68□□□□□ -1.98
CHD8Q9HCK8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CHD8Q9HCK8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 IFNNP1-201ENST00000429219 553 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AC112653.1-201ENST00000443851 386 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 MFSD8-233ENST00000641482 4860 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 Z82205.1-201ENST00000428456 297 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 AC010401.1-201ENST00000463867 348 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 RPL7P20-201ENST00000520308 745 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 CTSLP2-204ENST00000629029 392 ntBASIC2.67□□□□□ -1.98
CHD8Q9HCK8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CHD8Q9HCK8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 Y_RNA.205-201ENST00000364128 113 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 PPP1R11P1-201ENST00000486095 376 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 OR5H5P-201ENST00000503164 928 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 SNORA70.19-201ENST00000516717 90 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 OR5G4P-201ENST00000525251 760 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 OR7A8P-201ENST00000595427 913 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.6-201ENST00000603753 252 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.11-201ENST00000604059 253 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.10-201ENST00000604330 253 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC008162.1-201ENST00000604718 254 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.1-201ENST00000604752 252 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.2-201ENST00000604983 252 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.5-201ENST00000605253 252 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.4-201ENST00000605279 254 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.12-201ENST00000605291 253 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.8-201ENST00000605353 252 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.9-201ENST00000605428 253 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL670379.7-201ENST00000605823 252 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AP006437.1-201ENST00000641440 3685 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AL139276.1-201ENST00000311910 1001 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHD8Q9HCK8 Y_RNA.36-201ENST00000362602 112 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 RNU6-76P-201ENST00000384060 104 ntBASIC2.66□□□□□ -1.98
CHD8Q9HCK8 SNORA80E-201ENST00000384744 137 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms