Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC124947.2-202ENST00000552735 133 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPS3AP4-201ENST00000555161 764 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RPL21P7-201ENST00000557463 483 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AL133457.1-201ENST00000564251 987 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 MAGOH2P-202ENST00000584384 429 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC009977.1-201ENST00000586015 570 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 VN1R79P-201ENST00000593540 513 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC087283.1-201ENST00000604029 1074 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC116447.1-201ENST00000613153 453 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC104010.1-201ENST00000616889 150 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC019206.1-201ENST00000621938 425 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 AC091953.3-201ENST00000623220 236 ntBASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AMBRA1Q9C0C7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNU1-20P-201ENST00000363314 162 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-867P-201ENST00000364956 107 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 SNORA51.6-201ENST00000384151 125 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-809P-201ENST00000384461 107 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 EIF5P1-201ENST00000400019 1231 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL023807.1-201ENST00000407932 359 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNA5SP146-201ENST00000410743 123 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 GLRXP1-201ENST00000423261 334 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC096632.1-201ENST00000427395 310 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 BX890604.2-201ENST00000427883 474 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC073614.1-201ENST00000438690 650 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RPL36AP15-201ENST00000444514 266 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL672167.3-201ENST00000465951 960 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 ACTR3P3-201ENST00000480448 893 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC116353.2-201ENST00000505332 712 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC091133.4-201ENST00000511142 308 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNU6-718P-201ENST00000516166 105 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNA5SP43-201ENST00000516559 110 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC092325.1-201ENST00000566449 554 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL161729.4-201ENST00000604650 476 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 FAM25E-202ENST00000608562 189 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL159169.3-201ENST00000608871 561 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 EIF3FP1-201ENST00000613970 806 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC072046.2-201ENST00000618366 268 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AL008636.1-201ENST00000625038 1018 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AC008758.3-201ENST00000507003 1829 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 AP000756.2-201ENST00000624168 2567 ntBASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AMBRA1Q9C0C7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AMBRA1Q9C0C7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
AMBRA1Q9C0C7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
AMBRA1Q9C0C7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.49□□□□□ -1.69
AMBRA1Q9C0C7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms