Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC012213.4-201ENST00000606457 354 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC013412.1-201ENST00000610687 192 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM4Q9C037 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 AC119674.1-212ENST00000641155 993 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TRIM4Q9C037 AL049781.1-201ENST00000623195 3585 ntBASIC3.36□□□□□ -1.87
TRIM4Q9C037 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM4Q9C037 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC024341.1-201ENST00000526444 1552 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 XKRYP4-201ENST00000414395 483 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC005019.1-201ENST00000436455 431 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 XKRYP5-201ENST00000449659 483 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC146507.2-201ENST00000460608 476 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC012181.1-201ENST00000479895 423 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 RPL7L1P13-201ENST00000511702 739 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC067852.3-201ENST00000589177 561 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC020914.6-201ENST00000594327 272 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC078899.3-201ENST00000599065 212 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC084373.1-201ENST00000603311 235 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
TRIM4Q9C037 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM4Q9C037 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM4Q9C037 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM4Q9C037 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 RNU4-35P-201ENST00000362588 141 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 SNORA5B-201ENST00000363786 132 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 SNORA80A-201ENST00000363922 136 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM4Q9C037 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 MRPS18BP2-201ENST00000434310 759 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC010655.1-201ENST00000449336 292 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 CCRL1P1-201ENST00000449542 1053 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM4Q9C037 AP001992.1-205ENST00000462248 379 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC093278.1-201ENST00000494700 600 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 RNA5SP341-201ENST00000516261 117 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC067852.4-201ENST00000590314 478 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 AP003072.4-201ENST00000624580 310 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC084035.1-201ENST00000634543 607 ntBASIC3.34□□□□□ -1.87
TRIM4Q9C037 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM4Q9C037 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM4Q9C037 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM4Q9C037 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRIM4Q9C037 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM4Q9C037 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM4Q9C037 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM4Q9C037 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM4Q9C037 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 RPL7P26-201ENST00000333817 754 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 Y_RNA.62-201ENST00000362840 99 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 RNA5SP189-201ENST00000364920 115 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM4Q9C037 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM4Q9C037 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.33□□□□□ -1.88
TRIM4Q9C037 SETP8-201ENST00000435341 628 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms