Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC113430.1-201ENST00000506872 718 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC005832.3-201ENST00000537929 631 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 YPEL5P3-201ENST00000547227 352 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC012414.6-201ENST00000568241 401 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC008507.1-201ENST00000587506 734 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC104662.1-201ENST00000604448 511 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC092354.1-201ENST00000606057 376 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AF250324.2-201ENST00000608299 610 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC008083.4-201ENST00000615076 444 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AL136981.2-201ENST00000617319 734 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC007342.8-201ENST00000623278 678 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC139713.2-215ENST00000641428 5037 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AP000756.2-201ENST00000624168 2567 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 MTCO1P6-201ENST00000481192 1384 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC092447.7-201ENST00000422212 1621 ntBASIC4.98□□□□□ -1.61
SALL3Q9BXA9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
SALL3Q9BXA9 AC022893.2-201ENST00000564832 3296 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RPL32P3-201ENST00000359025 275 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 Y_RNA.41-201ENST00000362646 102 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNU4-44P-201ENST00000363050 141 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNA5SP80-201ENST00000410475 111 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL356095.1-201ENST00000417217 199 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC234064.1-201ENST00000436312 247 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 TBCAP1-201ENST00000436520 327 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC083863.1-201ENST00000438811 231 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL353748.1-201ENST00000440753 474 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC009263.1-201ENST00000441193 1239 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL589765.3-201ENST00000446084 462 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC005002.1-201ENST00000447458 540 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 NUTF2P3-201ENST00000448540 384 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNA5SP269-201ENST00000459032 137 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC010469.1-201ENST00000463864 576 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC103987.1-201ENST00000473394 348 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 NCOR1P1-202ENST00000486162 291 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNU6-1308P-201ENST00000516817 103 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC083923.1-201ENST00000523708 376 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC092747.2-201ENST00000545069 983 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 OR4K7P-201ENST00000580232 945 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC103881.1-201ENST00000603476 538 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC069234.5-201ENST00000611056 416 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC026368.1-201ENST00000614934 690 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MIR492-201ENST00000638676 116 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 ZNF962P-201ENST00000443465 3140 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC016588.2-201ENST00000632484 3021 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 OR11H4-201ENST00000315409 1082 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNU6-621P-201ENST00000364752 109 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MTND4LP20-201ENST00000402379 270 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 ZNF603P-201ENST00000405613 487 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms