Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 HMGN1P24-201ENST00000412282 298 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 ISCA1P2-201ENST00000438679 421 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 TPMTP4-201ENST00000450749 678 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AC108078.3-201ENST00000502633 489 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AC006539.2-201ENST00000601729 572 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AC004972.1-201ENST00000623934 2209 ntBASIC3.96□□□□□ -1.77
RPAP1Q9BWH6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.96□□□□□ -1.77
RPAP1Q9BWH6 RNF6P1-201ENST00000444889 1784 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 PWAR6-201ENST00000552334 4618 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AL024507.1-201ENST00000412741 274 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 CR848007.2-201ENST00000424918 787 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC010683.1-201ENST00000473673 378 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 RPS3AP43-201ENST00000479743 781 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC097462.2-201ENST00000504623 481 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 HAUS1P3-201ENST00000523909 662 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC006518.1-201ENST00000541449 943 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC015917.1-201ENST00000579654 510 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AC006254.3-201ENST00000603353 884 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AL096803.3-201ENST00000609032 532 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AL450489.1-201ENST00000612071 468 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 AP003072.4-201ENST00000624580 310 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 CFTRP2-201ENST00000634304 199 ntBASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPAP1Q9BWH6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 RNU6-805P-201ENST00000365643 106 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AL353678.1-201ENST00000422735 741 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AL049610.1-201ENST00000423374 372 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 MTND4LP14-201ENST00000429447 288 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 MTND5P8-201ENST00000449817 1083 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 CFTRP1-201ENST00000456646 183 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 RPS4XP22-201ENST00000480755 780 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 TRAV31-201ENST00000502780 342 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 RNA5SP341-201ENST00000516261 117 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AP002812.4-201ENST00000532139 286 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AC025260.1-201ENST00000548858 430 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AP003117.1-201ENST00000602771 554 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 GTF2H2B-203ENST00000508065 1432 ntBASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.95□□□□□ -1.78
RPAP1Q9BWH6 AL592437.2-201ENST00000421655 2434 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 SNORD56.3-201ENST00000363507 71 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 RNU6-883P-201ENST00000384597 107 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 NPM1P10-201ENST00000398310 865 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 ZNF965P-201ENST00000432501 817 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AC011825.1-201ENST00000484967 388 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AC023050.1-201ENST00000498198 304 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AC069306.1-201ENST00000507006 843 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 Vault.1-201ENST00000516474 102 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 LARP7P3-201ENST00000579888 337 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AP000919.1-202ENST00000581139 1264 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 VN1R84P-201ENST00000593697 235 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 AL157817.1-201ENST00000614264 790 ntBASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPAP1Q9BWH6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms