Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AF228730.2-201ENST00000438784 848 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 EEF1A1P39-201ENST00000440791 250 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AL589880.1-201ENST00000448271 287 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX3Q99909 RPL21P104-201ENST00000464143 478 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC108734.3-201ENST00000481241 1165 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 MTCO3P35-201ENST00000485582 781 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 GTF2IP9-201ENST00000502460 301 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 ATP1B1P1-201ENST00000509767 915 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX3Q99909 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 IGKV2D-19-201ENST00000523346 262 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX3Q99909 OR8G5-201ENST00000524943 1041 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX3Q99909 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.55□□□□□ -1.84
SSX3Q99909 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 PSMB7P1-201ENST00000556349 514 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC138915.2-201ENST00000569776 97 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC012182.1-201ENST00000570133 895 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 RPL23AP87-202ENST00000573039 466 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 AL355812.1-201ENST00000603215 216 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC091946.2-201ENST00000606105 291 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 RNU4-5P-201ENST00000607255 135 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AP002360.3-201ENST00000607673 710 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AC006329.2-201ENST00000611491 394 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 MIR6716-201ENST00000613413 80 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX3Q99909 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.55□□□□□ -1.84
SSX3Q99909 MKKS-204ENST00000639674 192 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
SSX3Q99909 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.55□□□□□ -1.84
SSX3Q99909 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSX3Q99909 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.55□□□□□ -1.84
SSX3Q99909 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX3Q99909 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX3Q99909 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 AC004925.1-201ENST00000624256 2706 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SSX3Q99909 ZNF29P-201ENST00000225587 168 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 SNORD82-201ENST00000365530 70 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 RNU6-730P-201ENST00000383954 104 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AL136310.1-201ENST00000404926 654 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 SNORA11F-201ENST00000408237 128 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 RNU2-42P-201ENST00000410697 113 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 RNU4-22P-201ENST00000411058 166 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 OR8G2P-201ENST00000412796 908 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 LUZP4P1-201ENST00000415420 344 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 NANOGP5-201ENST00000424456 877 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC006548.1-201ENST00000427470 102 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX3Q99909 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX3Q99909 PRELID3BP10-201ENST00000431957 584 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 ATP5HP2-201ENST00000433885 485 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AL132765.1-201ENST00000434165 553 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX3Q99909 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.54□□□□□ -1.84
SSX3Q99909 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 RRM2P4-201ENST00000441721 562 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX3Q99909 AL009048.1-201ENST00000450437 298 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 ZNF886P-201ENST00000450781 723 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 PTGES3P5-201ENST00000455109 434 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SSX3Q99909 AC068587.1-201ENST00000483613 781 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC108078.3-201ENST00000502633 489 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 MTCYBP16-201ENST00000509187 1129 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 SNORA31.9-201ENST00000516429 84 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 PDCL2P2-201ENST00000533651 189 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.54□□□□□ -1.84
SSX3Q99909 AL121603.1-201ENST00000553815 142 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 MTND1P8-201ENST00000571424 950 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms