Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC010205.1-201ENST00000616668 449 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC006065.6-201ENST00000625201 545 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 AL450326.2-201ENST00000421913 1962 ntBASIC5.04□□□□□ -1.6
CDK5RAP1Q96SZ6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL731566.1-201ENST00000620490 1937 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL121950.1-201ENST00000624993 2077 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 A2MP1-204ENST00000566278 4130 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU6-877P-201ENST00000383868 107 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 U3.30-201ENST00000391308 210 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RPS4XP9-201ENST00000405151 780 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SKP247-201ENST00000411094 308 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 GPM6BP2-201ENST00000432046 144 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC016831.4-201ENST00000438302 307 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 GPM6BP1-201ENST00000446387 144 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL10P17-201ENST00000453852 316 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC007686.1-201ENST00000488511 463 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC096576.1-201ENST00000489014 359 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC114981.1-201ENST00000503897 678 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 SCARNA22-201ENST00000503991 125 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 SNX5P1-201ENST00000505757 1041 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC110792.2-201ENST00000510278 224 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU6-1045P-201ENST00000516321 107 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU6-709P-201ENST00000517257 104 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 OR6C73P-201ENST00000546432 358 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 PSMA3P-201ENST00000555485 635 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SL802P-201ENST00000577858 299 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 KC877982.1-201ENST00000602313 470 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AL160413.1-201ENST00000622780 310 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 AC079228.1-201ENST00000624774 1049 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDK5RAP1Q96SZ6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AC012618.3-205ENST00000637896 1496 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 TLK1P1-201ENST00000456760 2440 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 SEC63P2-201ENST00000503863 1939 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AC006971.1-201ENST00000407916 4486 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 Y_RNA.86-201ENST00000363020 111 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 Y_RNA.97-201ENST00000363094 102 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 RNU4-7P-201ENST00000364758 141 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 UBBP2-201ENST00000376781 231 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 RPL23AP29-201ENST00000397284 453 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AL161909.1-201ENST00000397390 712 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 RN7SKP285-201ENST00000410137 318 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 RNU6-195P-201ENST00000411352 109 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 JKAMPP1-201ENST00000413804 919 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AL590139.1-201ENST00000416267 400 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 MTCO3P12-201ENST00000416718 547 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 MTCO2P12-201ENST00000427426 682 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AC018644.1-201ENST00000429934 551 ntBASIC5.02□□□□□ -1.61
CDK5RAP1Q96SZ6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms