Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC006927.4-201ENST00000639187 543 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AL450326.2-201ENST00000421913 1962 ntBASIC4.83□□□□□ -1.64
SIN3AQ96ST3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SIN3AQ96ST3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 RNA5SP267-201ENST00000364893 126 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MTATP6P20-201ENST00000414147 562 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 RPL23AP82-202ENST00000427528 469 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC092634.2-201ENST00000428146 1010 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC005326.1-201ENST00000429197 123 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MTND2P5-201ENST00000432656 1006 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 PTGES3P1-201ENST00000439531 483 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 CASP3P1-201ENST00000446037 609 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC244505.3-201ENST00000454598 187 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 CENPBD1P1-201ENST00000464061 469 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC007537.2-201ENST00000472093 511 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC111193.1-201ENST00000504097 155 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC008565.1-201ENST00000509046 885 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC074250.1-201ENST00000511117 192 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 RN7SKP116-201ENST00000516902 319 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC104417.1-201ENST00000523974 751 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 OR10V3P-201ENST00000525712 725 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 NDUFS5P6-201ENST00000529136 295 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MTATP6P24-201ENST00000576835 677 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MIR4276-201ENST00000584832 70 ntBASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIN3AQ96ST3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 RNF6P1-201ENST00000444889 1784 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 RNU6-353P-201ENST00000364266 108 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 MIR184-201ENST00000384962 84 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 MIR708-201ENST00000390708 88 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 ANAPC10P1-201ENST00000395991 556 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AL365396.1-201ENST00000430854 671 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AL050321.1-201ENST00000432363 400 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 GTF2IP3-201ENST00000433887 494 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 RPS26P30-201ENST00000443431 335 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC239809.1-201ENST00000450470 217 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 PRSS3P4-201ENST00000453323 162 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 CDC42P1-201ENST00000456658 548 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 RPL7P49-201ENST00000471402 708 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC020699.1-201ENST00000505161 445 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC008837.1-201ENST00000511513 412 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC119751.1-201ENST00000513357 765 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 PRELID3BP4-201ENST00000515476 571 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 RN7SKP265-201ENST00000516448 223 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 POLR2KP1-201ENST00000553226 168 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC023824.3-201ENST00000569003 562 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC009974.1-201ENST00000608881 455 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 PART1_2.1-201ENST00000612397 250 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC100793.4-201ENST00000613683 429 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC009464.1-201ENST00000615731 469 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC006963.1-201ENST00000624003 1052 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 BX649567.1-201ENST00000642071 1134 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AC073055.1-201ENST00000456901 1621 ntBASIC4.81□□□□□ -1.64
SIN3AQ96ST3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.81□□□□□ -1.64
SIN3AQ96ST3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 MTND4P10-201ENST00000446199 1363 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC019155.1-201ENST00000382242 574 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 MIR7-3-201ENST00000384898 110 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms