Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPL7P20-201ENST00000520308 745 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 OR5BN1P-201ENST00000532955 829 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 TGIF1P1-201ENST00000558095 802 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 MIR4781-201ENST00000585250 76 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AC007938.3-201ENST00000604965 623 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 OR4G1P-202ENST00000641173 1788 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 RNU1-89P-201ENST00000384592 164 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 RPS12P23-201ENST00000419579 400 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 RPL7P52-201ENST00000449200 742 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AC009039.2-201ENST00000624524 529 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 HMGB1P48-201ENST00000446155 598 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 AL356490.1-201ENST00000623079 479 ntBASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 DDX18P3-201ENST00000404856 2007 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 MIR30E-201ENST00000362104 92 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 RNU6-55P-201ENST00000411092 107 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 RNU6-954P-201ENST00000411355 107 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC093663.2-201ENST00000484625 313 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC116337.1-201ENST00000509680 687 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC005921.1-201ENST00000510589 286 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 RNA5SP480-201ENST00000516840 109 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC022884.3-201ENST00000579571 248 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 SNORD114-1-201ENST00000362705 72 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 RPL7P25-201ENST00000404151 721 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 RNU4-53P-201ENST00000410828 140 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 RPL7P10-201ENST00000417407 739 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC113430.1-201ENST00000506872 718 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 CUL1P1-201ENST00000509510 2425 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 AL031985.3-201ENST00000565390 2449 ntBASIC2.32□□□□□ -2.04
CSMD1Q96PZ7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 RPL23AP16-201ENST00000441715 421 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 RNA5SP282-201ENST00000516355 108 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC025034.2-201ENST00000623264 286 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 MIR148B-201ENST00000362252 99 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 RNU6-618P-201ENST00000363518 112 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 ZNF603P-201ENST00000405613 487 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 Y_RNA.374-201ENST00000365606 101 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 RN7SL330P-201ENST00000469709 307 ntBASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
CSMD1Q96PZ7 RNA5SP325-201ENST00000363756 130 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 RPL23AP22-201ENST00000437556 453 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 OR5H3P-201ENST00000502817 919 ntBASIC2.3□□□□□ -2.04
CSMD1Q96PZ7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms