Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 MTND5P22-201ENST00000458380 195 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 RPL35AP28-201ENST00000459730 331 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC068587.1-201ENST00000483613 781 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC021146.2-201ENST00000504736 556 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 TXNP6-201ENST00000510190 310 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 RNA5SP373-201ENST00000517271 95 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC019322.1-201ENST00000571869 389 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC115085.1-201ENST00000588924 229 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC009597.2-201ENST00000604659 592 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC133644.2-201ENST00000608142 540 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC004908.2-201ENST00000609090 574 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC85AQ96PX6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RNU6-343P-201ENST00000364709 104 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RPL7P60-201ENST00000397636 735 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RNU2-39P-201ENST00000410604 198 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RNU6-193P-201ENST00000410977 107 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RN7SKP279-201ENST00000411383 298 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RPS15AP12-201ENST00000419498 388 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 MTCO3P21-201ENST00000430791 643 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AZGP1P2-201ENST00000454506 345 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AL389915.2-201ENST00000454576 441 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 GMFBP1-201ENST00000467831 427 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 ATP5LP5-201ENST00000483050 299 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RNU4-29P-201ENST00000515943 174 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 Y_RNA.718-201ENST00000517110 102 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RNU6-1220P-201ENST00000517126 108 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 MIR4436B2-201ENST00000581415 91 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 MIR4436B1-201ENST00000583272 91 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 CYP2C61P-201ENST00000604072 290 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC124303.1-201ENST00000605703 360 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 Mico1.1-201ENST00000611698 204 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AL713922.2-201ENST00000619384 716 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AL078621.3-201ENST00000623707 2042 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 AC097461.1-201ENST00000568928 2821 ntBASIC6.72□□□□□ -1.33
CCDC85AQ96PX6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.71□□□□□ -1.33
CCDC85AQ96PX6 AC007159.1-201ENST00000566529 4706 ntBASIC6.71□□□□□ -1.33
CCDC85AQ96PX6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC85AQ96PX6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 Y_RNA.133-201ENST00000363428 110 ntBASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 Y_RNA.401-201ENST00000383965 117 ntBASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 RNU6-196P-201ENST00000384315 107 ntBASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 PRRC2CP1-201ENST00000404428 159 ntBASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 AL023807.1-201ENST00000407932 359 ntBASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 PRELID3BP11-201ENST00000414230 479 ntBASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC85AQ96PX6 AL161631.1-201ENST00000417933 486 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms