Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 RN7SKP43-201ENST00000516173 320 ntBASIC2.36□□□□□ -2.03
AP1S3Q96PC3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AF230666.2-201ENST00000602328 725 ntBASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AC091057.2-201ENST00000602594 792 ntBASIC2.36□□□□□ -2.03
AP1S3Q96PC3 DUXAP4-201ENST00000603046 613 ntBASIC2.36□□□□□ -2.03
AP1S3Q96PC3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AL110115.1-201ENST00000614396 364 ntBASIC2.36□□□□□ -2.03
AP1S3Q96PC3 AC127502.3-201ENST00000636170 1206 ntBASIC2.36□□□□□ -2.03
AP1S3Q96PC3 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
AP1S3Q96PC3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 SNORA14A-201ENST00000364773 135 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 RPL21P17-201ENST00000397467 475 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 MIR1289-1-201ENST00000408836 144 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 RNA5SP129-201ENST00000410276 118 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 RPS15AP40-201ENST00000419621 391 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC005351.1-201ENST00000511152 786 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 NPM1P41-201ENST00000512920 831 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC109635.4-202ENST00000531666 412 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AADACP1-206ENST00000561502 1193 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 MTND5P24-201ENST00000438892 1767 ntBASIC2.35□□□□□ -2.03
AP1S3Q96PC3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
AP1S3Q96PC3 AC233263.6-201ENST00000631132 1963 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 METTL21EP-201ENST00000298105 713 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 RPS3AP26-201ENST00000398259 784 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 RAP1BP1-201ENST00000412709 553 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AL807761.1-201ENST00000417622 171 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 YPEL5P1-201ENST00000419731 367 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC007064.3-201ENST00000422608 359 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 ATP5JP1-201ENST00000431631 322 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC104472.2-201ENST00000469035 601 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 RPL21P131-201ENST00000497298 483 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 SNORA31.15-201ENST00000516771 132 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 ELOCP31-201ENST00000540463 467 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 MIR4276-201ENST00000584832 70 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC073657.2-201ENST00000605661 303 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AL590282.1-201ENST00000610379 1136 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 AC011472.4-201ENST00000615848 491 ntBASIC2.34□□□□□ -2.03
AP1S3Q96PC3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms