Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RNU6-150P-201ENST00000516237 95 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 IGLVIV-65-201ENST00000517313 360 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC060788.1-201ENST00000521318 469 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC092851.1-201ENST00000535964 478 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RSL24D1P11-201ENST00000591045 491 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RPL12P25-202ENST00000598100 674 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC119751.7-201ENST00000600494 245 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC105429.2-201ENST00000610567 517 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AC078899.5-201ENST00000612475 178 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AL138721.1-201ENST00000616756 179 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SL722P-201ENST00000617780 284 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 RN7SL565P-201ENST00000618246 284 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AP001273.1-201ENST00000624493 3152 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 AL133243.3-201ENST00000617415 3004 ntBASIC4.97□□□□□ -1.61
CDK5RAP3Q96JB5 LINC00561-201ENST00000565815 2738 ntBASIC4.96□□□□□ -1.61
CDK5RAP3Q96JB5 EIF2AP4-201ENST00000424793 1781 ntBASIC4.96□□□□□ -1.61
CDK5RAP3Q96JB5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RNU4-21P-201ENST00000362802 126 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RNU6-433P-201ENST00000363216 104 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 U3.15-201ENST00000365398 212 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 SNORD116-4-201ENST00000384733 96 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 MIR129-1-201ENST00000384972 72 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RNA5SP372-201ENST00000390836 115 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RNA5SP332-201ENST00000391063 115 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 MIR937-201ENST00000401271 86 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 HDGFP1-201ENST00000405943 252 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC069218.2-201ENST00000411665 344 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 ZYG11AP1-201ENST00000430329 837 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 UBE2V1P3-201ENST00000439651 417 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC011753.3-201ENST00000443436 406 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 BX276092.4-201ENST00000452056 248 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RPS29P22-201ENST00000472363 168 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 RN7SL817P-201ENST00000480777 288 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 DEFB109F-201ENST00000491870 277 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC006499.5-201ENST00000505037 514 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC006499.2-201ENST00000513470 337 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 GTF2IP22-201ENST00000554443 182 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC008507.1-201ENST00000587506 734 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 AC012409.3-201ENST00000611343 981 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 CR383658.2-201ENST00000547576 1525 ntBASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.96□□□□□ -1.62
CDK5RAP3Q96JB5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK5RAP3Q96JB5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP3Q96JB5 RNU6-462P-201ENST00000362659 105 ntBASIC4.95□□□□□ -1.62
CDK5RAP3Q96JB5 Y_RNA.194-201ENST00000363985 102 ntBASIC4.95□□□□□ -1.62
CDK5RAP3Q96JB5 RNU6-1243P-201ENST00000364028 107 ntBASIC4.95□□□□□ -1.62
CDK5RAP3Q96JB5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK5RAP3Q96JB5 MIR124-3-201ENST00000384866 87 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms