Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ISCA1P2-201ENST00000438679 421 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 MTND2P4-201ENST00000445034 1004 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RPL23AP43-201ENST00000446445 471 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 OR6C5P-201ENST00000452388 923 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RPS27AP8-201ENST00000452665 445 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC026410.2-201ENST00000460281 156 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RN7SL385P-201ENST00000468873 276 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RNU6-150P-201ENST00000516237 95 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC092470.1-201ENST00000546187 132 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AL133457.1-201ENST00000564251 987 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 RPL23AP97-201ENST00000568955 471 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 MIR5186-201ENST00000577504 120 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 MIR3939-201ENST00000582614 106 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC115286.1-201ENST00000604298 434 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC010201.1-201ENST00000605051 540 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 OR2AS2P-201ENST00000606902 342 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC009090.3-201ENST00000616553 565 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 AC099063.3-201ENST00000642066 185 ntBASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.26□□□□□ -1.57
CHMP4CQ96CF2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 RNA5SP88-201ENST00000365560 109 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 ENSAP1-201ENST00000392855 326 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC016769.3-201ENST00000396562 315 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 RPL23AP39-201ENST00000415533 405 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC083875.1-201ENST00000419509 405 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 RBMY1KP-201ENST00000423480 476 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 MTND4P32-201ENST00000437189 1237 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC118469.1-201ENST00000442943 488 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 RPL31P3-201ENST00000458430 332 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 RPL7P22-201ENST00000466005 733 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 RPS23P7-201ENST00000466210 444 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC109327.1-201ENST00000471666 403 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 VWA8P1-201ENST00000510889 176 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC006499.2-201ENST00000513470 337 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL121766.1-201ENST00000547436 487 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL161713.1-201ENST00000555538 145 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL121834.1-201ENST00000572284 509 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 MAGOH2P-202ENST00000584384 429 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC015726.1-201ENST00000602353 681 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AF131215.7-201ENST00000602443 707 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL590392.1-201ENST00000604960 446 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL513477.2-201ENST00000607858 568 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC024560.3-201ENST00000608482 349 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC114781.5-201ENST00000615297 108 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AC007546.2-201ENST00000623996 360 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 MIR4496-201ENST00000635896 61 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 DDX43P2-201ENST00000604753 1354 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL592437.2-201ENST00000421655 2434 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 AL049555.1-201ENST00000562834 1933 ntBASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.25□□□□□ -1.57
CHMP4CQ96CF2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 SAGE4P-201ENST00000442271 3381 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 OR4G11P-202ENST00000642116 1414 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 RNU6-500P-201ENST00000362349 107 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 RNA5SP509-201ENST00000364577 119 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.24□□□□□ -1.57
CHMP4CQ96CF2 SEPT2P1-201ENST00000419651 180 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms