Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC005921.1-201ENST00000510589 286 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 RN7SKP92-201ENST00000517266 244 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 OR7E13P-201ENST00000526052 910 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AADACP1-206ENST00000561502 1193 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 IGHV3-29-201ENST00000604817 344 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC090948.1-201ENST00000607464 549 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AL078595.3-201ENST00000623815 1166 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC120349.2-201ENST00000625002 298 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 AC107982.1-201ENST00000507171 1300 ntBASIC3.6□□□□□ -1.83
RFT1Q96AA3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFT1Q96AA3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFT1Q96AA3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 NACA3P-201ENST00000359690 648 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 RNU6-216P-201ENST00000363282 104 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 RN7SKP235-201ENST00000410662 305 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 RNU2-37P-201ENST00000410695 177 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 RNU2-42P-201ENST00000410697 113 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 PGBD4P8-201ENST00000412993 562 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 VPS26BP1-201ENST00000417155 755 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC244098.2-201ENST00000422068 99 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC006548.1-201ENST00000427470 102 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 RPS3AP54-201ENST00000435535 734 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AL512326.1-201ENST00000443050 721 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AL500522.2-201ENST00000448562 343 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC092155.2-201ENST00000454675 477 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 RPL23AP81-201ENST00000455252 467 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AK3P4-201ENST00000504283 583 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 HIGD1AP10-201ENST00000527837 282 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC005832.3-201ENST00000537929 631 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 HIGD1AP17-201ENST00000554576 276 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC069366.1-201ENST00000583159 838 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC010928.3-201ENST00000587712 541 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 MTCO2P2-201ENST00000591258 225 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AL355812.1-201ENST00000603215 216 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AC073968.1-201ENST00000618594 637 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 CR381572.1-201ENST00000625098 102 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFT1Q96AA3 AF001550.2-201ENST00000636643 217 ntBASIC3.59□□□□□ -1.83
RFT1Q96AA3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.59□□□□□ -1.83
RFT1Q96AA3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RFT1Q96AA3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
RFT1Q96AA3 AL133383.2-201ENST00000622958 2336 ntBASIC3.59□□□□□ -1.84
RFT1Q96AA3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RFT1Q96AA3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFT1Q96AA3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 SNORA31-201ENST00000362607 130 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 RNU1-14P-201ENST00000362759 152 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 RNU4-92P-201ENST00000363783 136 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 RNU6-560P-201ENST00000364007 108 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 RNU6-761P-201ENST00000384148 107 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 RNU6-906P-201ENST00000384700 70 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 MTND4LP20-201ENST00000402379 270 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.58□□□□□ -1.84
RFT1Q96AA3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 AL450338.1-201ENST00000407987 512 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 RPS3AP25-201ENST00000411660 793 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 FAR2P2-201ENST00000413041 594 ntBASIC3.58□□□□□ -1.84
RFT1Q96AA3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms