Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATP2A3Q93084 AC079587.1-201ENST00000603846 277 ntBASIC4.57□□□□□ -1.68
ATP2A3Q93084 HSPE1P14-201ENST00000605812 302 ntBASIC4.57□□□□□ -1.68
ATP2A3Q93084 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.57□□□□□ -1.68
ATP2A3Q93084 AL138721.1-201ENST00000616756 179 ntBASIC4.57□□□□□ -1.68
ATP2A3Q93084 MKKS-204ENST00000639674 192 ntBASIC4.57□□□□□ -1.68
ATP2A3Q93084 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATP2A3Q93084 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
ATP2A3Q93084 AC068254.2-201ENST00000623938 3577 ntBASIC4.57□□□□□ -1.68
ATP2A3Q93084 AC139769.1-204ENST00000472297 1931 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2A3Q93084 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC087359.1-201ENST00000508335 1740 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AL121657.1-201ENST00000327215 531 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 MIR383-201ENST00000362257 73 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 RNU6-1243P-201ENST00000364028 107 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 RNU6-553P-201ENST00000364047 96 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 SNORD116-9-201ENST00000384000 95 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 SNORD116-3-201ENST00000384287 95 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 SNORD116-7-201ENST00000384404 95 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 SNORD116-5-201ENST00000384462 95 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AL078604.1-201ENST00000404609 466 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 ZNF603P-201ENST00000405613 487 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC073264.1-201ENST00000411508 416 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 TIMM9P2-201ENST00000419324 266 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 RPL23AP38-201ENST00000423801 469 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 FTH1P6-201ENST00000430768 320 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 MUPP-201ENST00000438111 566 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 MTCO3P16-201ENST00000454456 754 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 RPL31P3-201ENST00000458430 332 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 SNORD108-201ENST00000459332 71 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC092754.2-201ENST00000463506 460 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 MTND3P7-201ENST00000474435 343 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AP000926.1-201ENST00000479573 241 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC108475.1-201ENST00000507880 950 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 MTCO1P49-201ENST00000523429 802 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 CENPUP2-201ENST00000555897 1186 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC138915.2-201ENST00000569776 97 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC103987.3-201ENST00000582071 292 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 VN1R85P-201ENST00000601587 426 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC067959.1-201ENST00000604334 379 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC072039.2-201ENST00000608883 439 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 MIR7154-201ENST00000620673 73 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2A3Q93084 AC073530.2-201ENST00000623987 261 ntBASIC4.56□□□□□ -1.68
ATP2A3Q93084 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATP2A3Q93084 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.56□□□□□ -1.68
ATP2A3Q93084 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2A3Q93084 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.55□□□□□ -1.68
ATP2A3Q93084 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ATP2A3Q93084 MIR331-201ENST00000362302 94 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 Y_RNA.51-201ENST00000362725 102 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 RNU1-132P-201ENST00000364300 164 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.55□□□□□ -1.68
ATP2A3Q93084 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.55□□□□□ -1.68
ATP2A3Q93084 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATP2A3Q93084 RNU6-444P-201ENST00000383988 108 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 RNU6-253P-201ENST00000384730 105 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 ENSAP1-201ENST00000392855 326 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.55□□□□□ -1.68
ATP2A3Q93084 RN7SKP177-201ENST00000410567 355 ntBASIC4.55□□□□□ -1.68
ATP2A3Q93084 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.55□□□□□ -1.68
ATP2A3Q93084 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms