Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC008958.1-201ENST00000511047 682 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 RN7SKP234-201ENST00000517173 224 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC106038.2-201ENST00000520706 568 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC021755.1-201ENST00000559747 1447 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC015912.2-201ENST00000571053 181 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AF131215.7-201ENST00000602443 707 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 MTCYBP22-201ENST00000603788 447 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC025588.4-201ENST00000615802 908 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 MIR8059-201ENST00000620427 81 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC009318.4-201ENST00000620496 486 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC008443.7-201ENST00000622195 246 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 Z69908.1-201ENST00000622603 247 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC092192.1-201ENST00000633154 1018 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 CYP3A51P-201ENST00000633513 256 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 AC022893.2-201ENST00000564832 3296 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 ZNF833P-201ENST00000424938 1494 ntBASIC4.42□□□□□ -1.7
HMGB4Q8WW32 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGB4Q8WW32 MTCO1P23-201ENST00000415223 1526 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MAPK10-320ENST00000641462 6696 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MIR372-201ENST00000362225 67 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RN7SKP280-201ENST00000364196 304 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RNU6-723P-201ENST00000383973 107 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 VN1R8P-201ENST00000407739 893 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 CYCSP10-201ENST00000417973 294 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC083875.1-201ENST00000419509 405 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RPL23AP74-201ENST00000437246 471 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MRPL48P1-201ENST00000445390 636 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 ARPC3P5-201ENST00000448802 534 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MEMO1P3-201ENST00000459811 302 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC090453.1-201ENST00000495560 436 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MTND4LP31-201ENST00000514859 294 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 RNA5SP49-201ENST00000516450 115 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 NDUFA5P2-201ENST00000519723 344 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 OR5BC1P-201ENST00000529327 739 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AL121766.1-201ENST00000547436 487 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 HNRNPCP4-201ENST00000571636 900 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AL031985.2-201ENST00000600955 480 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AP003117.2-201ENST00000606010 545 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC135507.1-201ENST00000607214 561 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC106028.5-201ENST00000610332 395 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MIR7844-201ENST00000616161 122 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC112484.5-201ENST00000624189 228 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AL356596.1-201ENST00000624230 379 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC034229.5-201ENST00000624258 185 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 MIR4496-201ENST00000635896 61 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 AC068137.4-201ENST00000638485 296 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 NXPH1-205ENST00000602349 1953 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGB4Q8WW32 ZNF33CP-201ENST00000432492 2030 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 GDI2P1-201ENST00000429312 1336 ntBASIC4.41□□□□□ -1.7
HMGB4Q8WW32 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMGB4Q8WW32 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGB4Q8WW32 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGB4Q8WW32 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.4□□□□□ -1.7
HMGB4Q8WW32 IQCB2P-201ENST00000401788 1633 ntBASIC4.4□□□□□ -1.7
HMGB4Q8WW32 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGB4Q8WW32 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGB4Q8WW32 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms