Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC117440.1-201ENST00000474107 571 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RPS29P26-201ENST00000477483 171 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RNU6-1231P-201ENST00000517185 103 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 AC138473.1-201ENST00000605717 526 ntBASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM3Q8TF72 RNU6-697P-201ENST00000363348 107 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 RNU6-819P-201ENST00000364116 107 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 MTND3P20-201ENST00000407663 186 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 RPL7P8-201ENST00000411964 730 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AL845331.3-202ENST00000562856 261 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 ATP1B3P1-201ENST00000605365 821 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AC112503.1-201ENST00000608436 391 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AP006248.2-201ENST00000623309 592 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AC090971.4-201ENST00000560291 1800 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AL035407.1-201ENST00000429211 571 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AC069540.1-201ENST00000446320 988 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 ST13P14-201ENST00000474095 734 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 RN7SKP60-201ENST00000516985 239 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AC245128.3-201ENST00000594721 748 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 AC016911.1-201ENST00000613297 452 ntBASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
SHROOM3Q8TF72 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AL451142.2-201ENST00000429076 2090 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 RPS4XP8-201ENST00000402039 771 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 VN1R31P-201ENST00000417498 730 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 SLC31A1P1-201ENST00000451221 567 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 OR6C72P-201ENST00000451403 892 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 RNU7-170P-201ENST00000459303 61 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 snoU13.26-201ENST00000459452 105 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 SEPT7P6-201ENST00000469999 1143 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AC010374.2-201ENST00000512933 535 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AC092628.2-201ENST00000622492 339 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 AC095050.2-201ENST00000510748 1458 ntBASIC3.04□□□□□ -1.92
SHROOM3Q8TF72 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MIR365B-201ENST00000362317 111 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 DHFRP5-201ENST00000406944 564 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MTCO1P51-201ENST00000427672 1060 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL109933.2-201ENST00000452651 260 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 RPL31P53-201ENST00000457065 348 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 HMGB1P3-201ENST00000502802 616 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 RNU6-1334P-201ENST00000516032 105 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC009097.3-201ENST00000563557 1018 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 ELOCP29-201ENST00000588193 334 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL591516.1-201ENST00000611326 274 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC009159.1-201ENST00000618386 642 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MIR7843-201ENST00000622274 79 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC099506.2-201ENST00000623074 221 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MAPK10-373ENST00000641983 6772 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC107027.3-201ENST00000565095 3473 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL672296.1-201ENST00000427780 2158 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms