Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 CKS1BP1-201ENST00000555221 240 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 SETP1-201ENST00000556014 845 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 SYT14P1-202ENST00000600441 1448 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AF117829.1-206ENST00000621883 3802 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 HMGN2P8-201ENST00000391458 268 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 HMGB3P18-201ENST00000406327 590 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 RPL21P109-201ENST00000422213 475 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AC002075.2-201ENST00000425207 252 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AC112653.1-201ENST00000443851 386 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AC099560.2-201ENST00000457554 255 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC168Q8NDH2 AL353729.1-201ENST00000425044 720 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 MTCO1P52-201ENST00000433928 531 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 B3GNT2P1-201ENST00000434960 952 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC017007.4-201ENST00000503353 1352 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AL161781.1-201ENST00000354277 403 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 RNU6-618P-201ENST00000363518 112 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 SNORA36C-201ENST00000384289 132 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 MIR592-201ENST00000384959 97 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC008280.2-201ENST00000455473 307 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 RNA5SP154-201ENST00000516193 111 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 IGHV3-63-201ENST00000518422 341 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC020895.1-201ENST00000595362 272 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC007621.1-201ENST00000604544 437 ntBASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC168Q8NDH2 USP12PY-201ENST00000427677 1064 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 TAF9P1-201ENST00000445421 515 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 TAF9P2-201ENST00000454958 515 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 AL596275.2-204ENST00000641628 552 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 AL596275.2-206ENST00000641957 626 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 OR4G1P-202ENST00000641173 1788 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 KPNA2P2-201ENST00000419546 1489 ntBASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC168Q8NDH2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AP002088.1-201ENST00000382740 395 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC069218.2-201ENST00000411665 344 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 RPS12P18-201ENST00000442381 270 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AL162389.1-201ENST00000449233 177 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 MRPS31P2-201ENST00000451581 518 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC025445.1-201ENST00000502728 300 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 MIR8070-201ENST00000616510 88 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 MIR6779-201ENST00000617283 64 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC019080.5-201ENST00000624891 757 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 AC244205.2-202ENST00000635781 342 ntBASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC168Q8NDH2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms