Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RPL6P9-201ENST00000466502 859 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RPS27AP1-201ENST00000475545 471 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RPS3AP6-201ENST00000484430 795 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC013356.1-201ENST00000489027 564 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC093720.1-201ENST00000505681 714 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC093840.1-201ENST00000511599 336 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RN7SKP244-201ENST00000516513 307 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 LRRC6P1-201ENST00000532188 885 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 UBE2NP1-201ENST00000545592 458 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC068831.4-201ENST00000556118 109 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC006960.3-201ENST00000561845 705 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC090616.5-202ENST00000582111 297 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 SNORD39.3-201ENST00000584451 71 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC007566.2-201ENST00000603642 413 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AC112220.2-201ENST00000605513 533 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AL583856.2-201ENST00000606298 543 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AP001784.1-201ENST00000624107 428 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 AP003485.1-201ENST00000625093 753 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MIR3653-201ENST00000625572 110 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC71LQ8N9Z2 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC005261.4-201ENST00000600047 1385 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-582P-201ENST00000362989 107 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 RNU6-283P-201ENST00000364788 107 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 RPS26P8-201ENST00000393490 348 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 SSXP10-201ENST00000402595 565 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MTND4P3-201ENST00000417829 541 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 HMGB3P20-201ENST00000417997 600 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MTCO2P23-201ENST00000425216 680 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MTCO1P53-201ENST00000441633 699 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 CEACAMP9-201ENST00000442990 513 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 RPS26P56-201ENST00000444468 240 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL590399.6-201ENST00000446396 307 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 COX6CP18-201ENST00000448769 222 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 NPM1P13-201ENST00000452663 865 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 HMGN2P16-201ENST00000456802 261 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 ARPC3P2-201ENST00000457786 533 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC011276.1-201ENST00000469688 323 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL136126.1-201ENST00000473603 402 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC110792.1-201ENST00000491826 472 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC005726.1-201ENST00000494679 427 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MTND4LP22-201ENST00000508209 276 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC023632.1-201ENST00000518463 375 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 OR5AP1P-201ENST00000529730 940 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 YPEL5P3-201ENST00000547227 352 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4509-3-201ENST00000578671 94 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4509-2-201ENST00000583920 94 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC245884.10-201ENST00000597355 337 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AC025588.3-201ENST00000604182 274 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AP005137.2-201ENST00000609238 400 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 MIR4509-1-201ENST00000618224 94 ntBASIC3.12□□□□□ -1.91
CCDC71LQ8N9Z2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms