Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AL391840.1-201ENST00000571144 367 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 VN1R79P-201ENST00000593540 513 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC068790.3-201ENST00000602988 553 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 DUXAP4-201ENST00000603046 613 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC105254.2-201ENST00000603636 436 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC018695.5-201ENST00000605872 315 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC011816.2-201ENST00000607089 556 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC126118.1-201ENST00000607744 628 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AL133173.2-201ENST00000614270 90 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AL732618.1-201ENST00000623251 301 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC095031.1-201ENST00000623685 672 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC073869.10-201ENST00000642016 354 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 GVINP1-202ENST00000531871 7271 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC024560.2-201ENST00000507981 1497 ntBASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
SYNPOQ8N3V7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNU4-44P-201ENST00000363050 141 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNU6-114P-201ENST00000384704 105 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNA5SP241-201ENST00000391326 114 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNA5SP113-201ENST00000410486 84 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNU2-47P-201ENST00000410649 186 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 MTCYBP24-201ENST00000420387 1106 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 C4BPAP2-201ENST00000428434 478 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC068287.1-201ENST00000430283 295 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AL359265.2-201ENST00000434367 631 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 FABP3P2-201ENST00000453169 399 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RN7SL459P-201ENST00000481078 302 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RPL23AP72-201ENST00000492447 435 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNA5SP230-201ENST00000517039 122 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RNU6-201P-201ENST00000517100 61 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 MTCO2P4-201ENST00000517968 247 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC009101.1-201ENST00000568135 242 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC099489.2-201ENST00000574976 260 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 RN7SL290P-201ENST00000578661 300 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 MIR4284-201ENST00000578924 81 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC108738.1-201ENST00000603703 237 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC055876.5-201ENST00000605667 259 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC009268.2-201ENST00000621925 457 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LRRC77P-213ENST00000637727 880 ntBASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNPOQ8N3V7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SYNPOQ8N3V7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms